RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 RAPGEF3O95398 923 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 ALBP02768 609 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 STAT3P40763 770 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 AFF1P51825 1210 aaKnown RBP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 ETF1P62495 437 aaKnown RBP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 LONRF2Q1L5Z9 754 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 KIF4BQ2VIQ3 1234 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 BRDTQ58F21 947 aaPredicted RBP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 CT47A1Q5JQC4 288 aaPredicted RBP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 PPM1JQ5JR12 505 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 FAM209AQ5JX71 171 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 YOD1Q5VVQ6 348 aaPredicted RBP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 C8orf86Q6ZUL3 223 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 DDX42Q86XP3 938 aaKnown RBP eCLIP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 RAVER1Q8IY67 606 aaKnown RBP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 CACTIN-AS1Q8N1I8 211 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 WNT8BQ93098 351 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 CLUHP3Q96NS8 147 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 WDR18Q9BV38 432 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 LGR4Q9BXB1 951 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 WNT10AQ9GZT5 417 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 EPN3Q9H201 632 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 NCOA5Q9HCD5 579 aaKnown RBP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 OSGEPQ9NPF4 335 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 ARHGEF4Q9NR80 690 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 GGA1Q9UJY5 639 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 HIF3AQ9Y2N7 669 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 ATP8A1Q9Y2Q0 1164 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 THRAP3Q9Y2W1 955 aaKnown RBP4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 TACC3Q9Y6A5 838 aa4.48□□□□□ -1.69
SCARNA15.2-201ENST00000516409 A0A1W2PQU0 124 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 AGRPO00253 132 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 DDX3YO15523 660 aaKnown RBP4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 RGS20O76081 388 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 DLGAP3O95886 979 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 TP53P04637 393 aaPredicted RBP4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 ALAS2P22557 587 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 NFKB2Q00653 900 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 ZC3H12AQ5D1E8 599 aaKnown RBP4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 C20orf204Q6ZNR8 217 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 RNF180Q86T96 592 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 TMEM192Q8IY95 271 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 PHACTR4Q8IZ21 702 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 KISS1RQ969F8 398 aaPredicted RBP4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 PPP1R14AQ96A00 147 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 SGSM3Q96HU1 749 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 SLC6A18Q96N87 628 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 CEP89Q96ST8 783 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 KIF2CQ99661 725 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 CDC6Q99741 560 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 DPH2Q9BQC3 489 aaPredicted RBP4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 CAAP1Q9H8G2 361 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 PICK1Q9NRD5 415 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 GABBR1Q9UBS5 961 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 TJP2Q9UDY2 1190 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 ADAM30Q9UKF2 790 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 MRPS23Q9Y3D9 190 aaKnown RBP4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 PCDHGC5Q9Y5F6 944 aa4.47□□□□□ -1.69
SCARNA15.2-201ENST00000516409 TRAV20A0A0B4J274 112 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 LOC100289279A0A1B0GTE1 492 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 C9IYK1 514 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TM4SF5O14894 197 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ADAM11O75078 769 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 AOC2O75106 756 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 RFPL3O75679 317 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MAP4K4O95819 1239 aaPredicted RBP4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 EPHX1P07099 455 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SOX5P35711 763 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CCNFP41002 786 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 MAP2K3P46734 347 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 PPP2R2AP63151 447 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ZC3H12BQ5HYM0 836 aaKnown RBP4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CNNM4Q6P4Q7 775 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CERS3Q8IU89 383 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 WFDC8Q8IUA0 241 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 GALNT11Q8NCW6 608 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 NANOS1Q8WY41 292 aaKnown RBP4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TMEM87BQ96K49 555 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ZNF512BQ96KM6 892 aaPredicted RBP4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 AARSD1Q9BTE6 412 aaKnown RBP4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 DHRS4Q9BTZ2 278 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TARS2Q9BW92 718 aaKnown RBP4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 FBRSQ9HAH7 460 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 LRP2BPQ9P2M1 347 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SUCOQ9UBS9 1254 aaKnown RBP4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 APEX2Q9UBZ4 518 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SUSD2Q9UGT4 822 aa4.46□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TRBV23-1A0A0A0MS06 115 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 CCDC163A0A0D9SF12 145 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 ANKRD34BA5PLL1 514 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 GSG1L2A8MUP6 293 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 PLD2O14939 933 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 TMPRSS2O15393 492 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 UBOX5O94941 541 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 SDSP20132 328 aa4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 PMS1P54277 932 aaKnown RBP4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 YARSP54577 528 aaKnown RBP4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 HNRNPUQ00839 825 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 EXOSC10Q01780 885 aaKnown RBP4.45□□□□□ -1.7
SCARNA15.2-201ENST00000516409 RING1Q06587 406 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms