RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 KLHL22Q53GT1 634 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 CRELD2Q6UXH1 353 aaPredicted RBP0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 NCAPG2Q86XI2 1143 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 SIRT2Q8IXJ6 389 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 UBE2FQ969M7 185 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 FANCD2OSQ96PS1 177 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 DISC1Q9NRI5 854 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 DZANK1Q9NVP4 752 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 EBF1Q9UH73 591 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 TESMINQ9Y4I5 508 aa0.91□□□□□ -2.26
RNU6-542P-201ENST00000516405 FITM1A5D6W6 292 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 NOTOA8MTQ0 251 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 CDK4P11802 303 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 IGFBP6P24592 240 aaPredicted RBP0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 GJA9P57773 515 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 TTLL4Q14679 1199 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 POU4F3Q15319 338 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 GLB1LQ6UWU2 654 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 GAREM2Q75VX8 874 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 SAPCD2Q86UD0 394 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZBTB8BQ8NAP8 495 aaPredicted RBP0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 DNERQ8NFT8 737 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 FNIP1Q8TF40 1166 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 CHMP7Q8WUX9 453 aaPredicted RBP0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 BSNDQ8WZ55 320 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 LARP4BQ92615 738 aaKnown RBP0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 WDR89Q96FK6 387 aaPredicted RBP0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 PIDD1Q9HB75 910 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 TSHZ2Q9NRE2 1034 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 PTGFRNQ9P2B2 879 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 SUSD2Q9UGT4 822 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 GPR160Q9UJ42 338 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 PCOLCE2Q9UKZ9 415 aa0.9□□□□□ -2.27
RNU6-542P-201ENST00000516405 CNTNAP2Q9UHC6 1331 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 WASH4PA8MWX3 477 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 MUSKO15146 869 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 RNGTTO60942 597 aaKnown RBP0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 NEFMP07197 916 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 HCLS1P14317 486 aaPredicted RBP0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 RFC5P40937 340 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 DGCR2P98153 550 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 PSME1Q06323 249 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 SNX17Q15036 470 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 SKIV2LQ15477 1246 aaKnown RBP0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZNF627Q7L945 461 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 MRGPRGQ86SM5 289 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 OXR1Q8N573 874 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZNF366Q8N895 744 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 GAS2L2Q8NHY3 880 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 PIWIL2Q8TC59 973 aaKnown RBP0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 FOXQ1Q9C009 403 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 INVSQ9Y283 1065 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 SYNGAP1Q96PV0 1343 aa0.89□□□□□ -2.27
RNU6-542P-201ENST00000516405 FAM155AB1AL88 458 aaPredicted RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 TRIM66O15016 1216 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZBTB7BO15156 539 aaPredicted RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 GPR42O15529 346 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 KRT4P19013 534 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 LCE1CQ5T751 118 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 LCE1BQ5T7P3 118 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 THAP5Q7Z6K1 395 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZNF761Q86XN6 746 aaPredicted RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 CARFQ8N187 725 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 TMEM102Q8N9M5 508 aaPredicted RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 Q8N9P0 234 aaPredicted RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 TSEN2Q8NCE0 465 aaKnown RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 SCG3Q8WXD2 468 aaKnown RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 NXPE3Q969Y0 559 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 TRIM56Q9BRZ2 755 aaKnown RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 DEF6Q9H4E7 631 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 QTRT2Q9H974 415 aaKnown RBP0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 PRDM10Q9NQV6 1147 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 PPP4R1LQ9P1A2 415 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZSWIM5Q9P217 1185 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 KANSL3Q9P2N6 904 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 SALL4Q9UJQ4 1053 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 KIAA1024Q9UPX6 916 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZNF536O15090 1300 aa0.88□□□□□ -2.27
RNU6-542P-201ENST00000516405 PLSCR1O15162 318 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 CYP11A1P05108 521 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 HTRA3P83110 453 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 C11orf91Q3C1V1 193 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 LSM12Q3MHD2 195 aaKnown RBP0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 TTC39BQ5VTQ0 682 aaPredicted RBP0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 RNF207Q6ZRF8 634 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 BARGINQ6ZT62 677 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 NLRX1Q86UT6 975 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 NLGN1Q8N2Q7 840 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 SCARB1Q8WTV0 552 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 ISL2Q96A47 359 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 ADGRE3Q9BY15 652 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 ATXN3LQ9H3M9 355 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 NOD1Q9Y239 953 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 PCDHGC5Q9Y5F6 944 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 CAPN6Q9Y6Q1 641 aa0.87□□□□□ -2.27
RNU6-542P-201ENST00000516405 UBAP1LF5GYI3 381 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 MSL3P1P0C860 447 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZFP36P26651 326 aaKnown RBP0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZNF76P36508 570 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 SELENOPP49908 381 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms