RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 DDAH1O94760 285 aa23.44■■□□□ 1.34
TRIO-223ENST00000515710 CDK8P49336 464 aa23.44■■□□□ 1.34
TRIO-223ENST00000515710 DNM1Q05193 864 aaKnown RBP23.44■■□□□ 1.34
TRIO-223ENST00000515710 SSRP1Q08945 709 aaKnown RBP23.44■■□□□ 1.34
TRIO-223ENST00000515710 USP48Q86UV5 1035 aa23.44■■□□□ 1.34
TRIO-223ENST00000515710 DGKHQ86XP1 1220 aa23.44■■□□□ 1.34
TRIO-223ENST00000515710 NUP133Q8WUM0 1156 aa23.44■■□□□ 1.34
TRIO-223ENST00000515710 ANKS1AQ92625 1134 aa23.44■■□□□ 1.34
TRIO-223ENST00000515710 C8orf76Q96K31 380 aa23.44■■□□□ 1.34
TRIO-223ENST00000515710 PPFIA3O75145 1194 aa23.43■■□□□ 1.34
TRIO-223ENST00000515710 KRT85P78386 507 aa23.43■■□□□ 1.34
TRIO-223ENST00000515710 PICALMQ13492 652 aa23.43■■□□□ 1.34
TRIO-223ENST00000515710 RBM28Q9NW13 759 aaKnown RBP23.43■■□□□ 1.34
TRIO-223ENST00000515710 FMNL1O95466 1100 aaPredicted RBP23.43■■□□□ 1.34
TRIO-223ENST00000515710 TSPY3P0CV98 308 aa23.43■■□□□ 1.34
TRIO-223ENST00000515710 TSPY8P0CW00 308 aa23.43■■□□□ 1.34
TRIO-223ENST00000515710 NCLP19338 710 aaKnown RBP23.43■■□□□ 1.34
TRIO-223ENST00000515710 RASA1P20936 1047 aa23.43■■□□□ 1.34
TRIO-223ENST00000515710 MBD3O95983 291 aa23.42■■□□□ 1.34
TRIO-223ENST00000515710 VIL1P09327 827 aaKnown RBP23.42■■□□□ 1.34
TRIO-223ENST00000515710 RBM5P52756 815 aaKnown RBP eCLIP23.42■■□□□ 1.344e-11■■□□□ 12.4
TRIO-223ENST00000515710 RSBN1LQ6PCB5 846 aaPredicted RBP23.42■■□□□ 1.34
TRIO-223ENST00000515710 FBXO18Q8NFZ0 1043 aa23.42■■□□□ 1.34
TRIO-223ENST00000515710 WASF1Q92558 559 aa23.42■■□□□ 1.34
TRIO-223ENST00000515710 OSBPL5Q9H0X9 879 aaPredicted RBP23.42■■□□□ 1.34
TRIO-223ENST00000515710 DDX4Q9NQI0 724 aaKnown RBP23.42■■□□□ 1.34
TRIO-223ENST00000515710 PPP1R1BQ9UD71 204 aaPredicted RBP23.41■■□□□ 1.34
TRIO-223ENST00000515710 MYH1P12882 1939 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 NPM3O75607 178 aaKnown RBP23.41■■□□□ 1.34
TRIO-223ENST00000515710 TROAPQ12815 778 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 NIM1KQ8IY84 436 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 TRIM22Q8IYM9 498 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 SLC44A5Q8NCS7 719 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 PHKBQ93100 1093 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 ALG1Q9BT22 464 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 IDI2Q9BXS1 227 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 GDPD2Q9HCC8 539 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 ZNRF3Q9ULT6 936 aa23.41■■□□□ 1.34
TRIO-223ENST00000515710 NMT2O60551 498 aa23.4■■□□□ 1.34
TRIO-223ENST00000515710 FOSBP53539 338 aa23.4■■□□□ 1.34
TRIO-223ENST00000515710 RCSD1Q6JBY9 416 aa23.4■■□□□ 1.34
TRIO-223ENST00000515710 CRACR2BQ8N4Y2 399 aaPredicted RBP23.4■■□□□ 1.34
TRIO-223ENST00000515710 SLC26A6Q9BXS9 759 aa23.4■■□□□ 1.34
TRIO-223ENST00000515710 IL17RBQ9NRM6 502 aa23.4■■□□□ 1.34
TRIO-223ENST00000515710 PTGER2P43116 358 aa23.39■■□□□ 1.34
TRIO-223ENST00000515710 GABPAQ06546 454 aa23.39■■□□□ 1.34
TRIO-223ENST00000515710 ATL3Q6DD88 541 aa23.39■■□□□ 1.34
TRIO-223ENST00000515710 NEDD1Q8NHV4 660 aa23.39■■□□□ 1.34
TRIO-223ENST00000515710 KAT14Q9H8E8 782 aa23.39■■□□□ 1.34
TRIO-223ENST00000515710 SWAP70Q9UH65 585 aa23.39■■□□□ 1.34
TRIO-223ENST00000515710 PSME4Q14997 1843 aa23.39■■□□□ 1.34
TRIO-223ENST00000515710 PSDA5PKW4 1024 aaPredicted RBP23.39■■□□□ 1.33
TRIO-223ENST00000515710 HLA-DOAP06340 250 aa23.39■■□□□ 1.33
TRIO-223ENST00000515710 GUCY1B3Q02153 619 aa23.39■■□□□ 1.33
TRIO-223ENST00000515710 NBPF11Q86T75 865 aa23.39■■□□□ 1.33
TRIO-223ENST00000515710 GPT2Q8TD30 523 aa23.39■■□□□ 1.33
TRIO-223ENST00000515710 MAP3K14Q99558 947 aa23.39■■□□□ 1.33
TRIO-223ENST00000515710 SCAND2PQ9GZW5 306 aaPredicted RBP23.39■■□□□ 1.33
TRIO-223ENST00000515710 TAOK3Q9H2K8 898 aa23.39■■□□□ 1.33
TRIO-223ENST00000515710 HDAC9Q9UKV0 1011 aa23.39■■□□□ 1.33
TRIO-223ENST00000515710 PSMD14O00487 310 aa23.38■■□□□ 1.33
TRIO-223ENST00000515710 FIBPO43427 364 aa23.38■■□□□ 1.33
TRIO-223ENST00000515710 CFAP100Q494V2 611 aa23.38■■□□□ 1.33
TRIO-223ENST00000515710 DHX36Q9H2U1 1008 aaKnown RBP23.38■■□□□ 1.33
TRIO-223ENST00000515710 TAOK2Q9UL54 1235 aa23.38■■□□□ 1.33
TRIO-223ENST00000515710 ADAMTSL1Q8N6G6 1762 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 FAM173BQ6P4H8 233 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 CTCFLQ8NI51 663 aaPredicted RBP23.37■■□□□ 1.33
TRIO-223ENST00000515710 GMLQ99445 158 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 RNF26Q9BY78 433 aaPredicted RBP23.37■■□□□ 1.33
TRIO-223ENST00000515710 GZF1Q9H116 711 aaPredicted RBP23.37■■□□□ 1.33
TRIO-223ENST00000515710 CFAP45Q9UL16 551 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 RAD17O75943 681 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 DEXIO95424 95 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 UBE2HP62256 183 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 TRIM29Q14134 588 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 SERPINB13Q9UIV8 391 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 ELP1O95163 1332 aa23.37■■□□□ 1.33
TRIO-223ENST00000515710 BRCA1P38398 1863 aaKnown RBP23.36■■□□□ 1.33
TRIO-223ENST00000515710 NFIAQ12857 509 aa23.36■■□□□ 1.33
TRIO-223ENST00000515710 KLHL34Q8N239 644 aa23.36■■□□□ 1.33
TRIO-223ENST00000515710 EHD4Q9H223 541 aa23.36■■□□□ 1.33
TRIO-223ENST00000515710 PCDHAC2Q9Y5I4 1007 aa23.36■■□□□ 1.33
TRIO-223ENST00000515710 OTUD7BQ6GQQ9 843 aa23.35■■□□□ 1.33
TRIO-223ENST00000515710 AGBL3Q8NEM8 1001 aa23.35■■□□□ 1.33
TRIO-223ENST00000515710 ZNF396Q96N95 335 aaPredicted RBP23.35■■□□□ 1.33
TRIO-223ENST00000515710 ECM29Q5VYK3 1845 aa23.35■■□□□ 1.33
TRIO-223ENST00000515710 COL4A5P29400 1685 aa23.35■■□□□ 1.33
TRIO-223ENST00000515710 GADD45BO75293 160 aaPredicted RBP23.35■■□□□ 1.33
TRIO-223ENST00000515710 KIF5BP33176 963 aa23.35■■□□□ 1.33
TRIO-223ENST00000515710 AKAP17AQ02040 695 aaKnown RBP23.35■■□□□ 1.33
TRIO-223ENST00000515710 KRT40Q6A162 431 aa23.35■■□□□ 1.33
TRIO-223ENST00000515710 BRAPQ7Z569 592 aa23.35■■□□□ 1.33
TRIO-223ENST00000515710 PNMA1Q8ND90 353 aa23.35■■□□□ 1.33
TRIO-223ENST00000515710 PRPF3O43395 683 aaKnown RBP23.34■■□□□ 1.33
TRIO-223ENST00000515710 TMTC3Q6ZXV5 915 aa23.34■■□□□ 1.33
TRIO-223ENST00000515710 OGFOD1Q8N543 542 aa23.34■■□□□ 1.33
TRIO-223ENST00000515710 JDP2Q8WYK2 163 aa23.34■■□□□ 1.33
TRIO-223ENST00000515710 TFIP11Q9UBB9 837 aaKnown RBP23.34■■□□□ 1.33
TRIO-223ENST00000515710 FAM198AQ9UFP1 575 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms