RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 HABP4Q5JVS0 413 aaKnown RBP12.43□□□□□ -0.42
LINC01843-201ENST00000515627 MAGEB6Q8N7X4 407 aa12.43□□□□□ -0.42
LINC01843-201ENST00000515627 RNF208Q9H0X6 261 aa12.43□□□□□ -0.42
LINC01843-201ENST00000515627 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
LINC01843-201ENST00000515627 MYH1P12882 1939 aa12.43□□□□□ -0.42
LINC01843-201ENST00000515627 DDX60LQ5H9U9 1706 aaKnown RBP12.42□□□□□ -0.42
LINC01843-201ENST00000515627 INHAP05111 366 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 ASNSP08243 561 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 UBXN2AP68543 259 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
LINC01843-201ENST00000515627 ERC1Q8IUD2 1116 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 PXYLP1Q8TE99 480 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 U2AF1L4Q8WU68 220 aaKnown RBP12.42□□□□□ -0.42
LINC01843-201ENST00000515627 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 RIOK1Q9BRS2 568 aaKnown RBP12.42□□□□□ -0.42
LINC01843-201ENST00000515627 AS3MTQ9HBK9 375 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 BIN2Q9UBW5 565 aaPredicted RBP12.42□□□□□ -0.42
LINC01843-201ENST00000515627 ZBTB21Q9ULJ3 1066 aa12.42□□□□□ -0.42
LINC01843-201ENST00000515627 PLXNB2O15031 1838 aa12.41□□□□□ -0.42
LINC01843-201ENST00000515627 H0YGN5 161 aa12.41□□□□□ -0.42
LINC01843-201ENST00000515627 HOXA7P31268 230 aaPredicted RBP12.41□□□□□ -0.42
LINC01843-201ENST00000515627 GCLCP48506 637 aaPredicted RBP12.41□□□□□ -0.42
LINC01843-201ENST00000515627 CRACR2BQ8N4Y2 399 aaPredicted RBP12.41□□□□□ -0.42
LINC01843-201ENST00000515627 NKX2-3Q8TAU0 364 aa12.41□□□□□ -0.42
LINC01843-201ENST00000515627 TXNRD2Q9NNW7 524 aa12.41□□□□□ -0.42
LINC01843-201ENST00000515627 ZBTB40Q9NUA8 1239 aa12.41□□□□□ -0.42
LINC01843-201ENST00000515627 MORF4L1Q9UBU8 362 aa12.41□□□□□ -0.42
LINC01843-201ENST00000515627 GJD2Q9UKL4 321 aa12.41□□□□□ -0.42
LINC01843-201ENST00000515627 COG6Q9Y2V7 657 aa12.41□□□□□ -0.42
LINC01843-201ENST00000515627 SGPL1O95470 568 aa12.4□□□□□ -0.42
LINC01843-201ENST00000515627 HLA-DOAP06340 250 aa12.4□□□□□ -0.42
LINC01843-201ENST00000515627 EVX2Q03828 476 aa12.4□□□□□ -0.42
LINC01843-201ENST00000515627 MAP3K12Q12852 859 aa12.4□□□□□ -0.42
LINC01843-201ENST00000515627 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC01843-201ENST00000515627 TATDN1Q6P1N9 297 aa12.4□□□□□ -0.42
LINC01843-201ENST00000515627 COA7Q96BR5 231 aa12.4□□□□□ -0.42
LINC01843-201ENST00000515627 P2RX7Q99572 595 aaKnown RBP12.4□□□□□ -0.42
LINC01843-201ENST00000515627 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
LINC01843-201ENST00000515627 GINM1Q9NU53 330 aa12.4□□□□□ -0.42
LINC01843-201ENST00000515627 COLQQ9Y215 455 aaPredicted RBP12.4□□□□□ -0.42
LINC01843-201ENST00000515627 TRIOBPQ9H2D6 2365 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 C19orf81C9J6K1 198 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 USP17L10C9JJH3 530 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 APBB1O00213 710 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 GH2P01242 217 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 USP5P45974 858 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 PLCD1P51178 756 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 RPAP2Q8IXW5 612 aaPredicted RBP12.39□□□□□ -0.43
LINC01843-201ENST00000515627 EDC3Q96F86 508 aaKnown RBP12.39□□□□□ -0.43
LINC01843-201ENST00000515627 TRIM34Q9BYJ4 488 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 EHD4Q9H223 541 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
LINC01843-201ENST00000515627 TMOD4Q9NZQ9 345 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
LINC01843-201ENST00000515627 NAV1Q8NEY1 1877 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 TCRBV5S4A2TA0A5A2 114 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 PDE6AP16499 860 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 SHMT1P34896 483 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 HERVK_113P62684 666 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 IRX3P78415 501 aaPredicted RBP12.38□□□□□ -0.43
LINC01843-201ENST00000515627 TRIM32Q13049 653 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 Q3C1V9 767 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 HSP90AB4PQ58FF6 505 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 TMED8Q6PL24 325 aaPredicted RBP12.38□□□□□ -0.43
LINC01843-201ENST00000515627 CERS3Q8IU89 383 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01843-201ENST00000515627 KIF1BPQ96EK5 621 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 DEFB118Q96PH6 123 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 SERPINB13Q9UIV8 391 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 DDX19BQ9UMR2 479 aa12.38□□□□□ -0.43
LINC01843-201ENST00000515627 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 GOLIM4O00461 696 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 FARP2O94887 1054 aaPredicted RBP12.37□□□□□ -0.43
LINC01843-201ENST00000515627 MS4A1P11836 297 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 FXR1P51114 621 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC01843-201ENST00000515627 GABPAQ06546 454 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 SLFNL1Q499Z3 407 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 CLASRPQ8N2M8 674 aaKnown RBP12.37□□□□□ -0.43
LINC01843-201ENST00000515627 ACER1Q8TDN7 264 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 TRIB2Q92519 343 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 C12orf42Q96LP6 360 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 PCDH10Q9P2E7 1040 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
LINC01843-201ENST00000515627 CHGBP05060 677 aa12.36□□□□□ -0.43
LINC01843-201ENST00000515627 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
LINC01843-201ENST00000515627 USP17L2Q6R6M4 530 aa12.36□□□□□ -0.43
LINC01843-201ENST00000515627 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
LINC01843-201ENST00000515627 LCORLQ8N3X6 602 aa12.36□□□□□ -0.43
LINC01843-201ENST00000515627 GPRC5AQ8NFJ5 357 aa12.36□□□□□ -0.43
LINC01843-201ENST00000515627 DPF3Q92784 378 aa12.36□□□□□ -0.43
LINC01843-201ENST00000515627 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
LINC01843-201ENST00000515627 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
LINC01843-201ENST00000515627 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms