RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 LIN37Q96GY3 246 aaPredicted RBP7.4□□□□□ -1.22
LINC01088-211ENST00000515597 WNT10AQ9GZT5 417 aa7.4□□□□□ -1.22
LINC01088-211ENST00000515597 DBX1A6NMT0 343 aa7.39□□□□□ -1.23
LINC01088-211ENST00000515597 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.39□□□□□ -1.23
LINC01088-211ENST00000515597 SEPT6Q14141 434 aa7.39□□□□□ -1.23
LINC01088-211ENST00000515597 PRAMEF13Q5VWM6 474 aa7.39□□□□□ -1.23
LINC01088-211ENST00000515597 RIN3Q8TB24 985 aa7.39□□□□□ -1.23
LINC01088-211ENST00000515597 SLC38A3Q99624 504 aa7.39□□□□□ -1.23
LINC01088-211ENST00000515597 ZNF865P0CJ78 1059 aaPredicted RBP7.38□□□□□ -1.23
LINC01088-211ENST00000515597 GRK4P32298 578 aa7.38□□□□□ -1.23
LINC01088-211ENST00000515597 LETMD1Q6P1Q0 360 aa7.38□□□□□ -1.23
LINC01088-211ENST00000515597 RNF19AQ9NV58 838 aa7.38□□□□□ -1.23
LINC01088-211ENST00000515597 LMCD1Q9NZU5 365 aa7.38□□□□□ -1.23
LINC01088-211ENST00000515597 PCDHB5Q9Y5E4 795 aa7.38□□□□□ -1.23
LINC01088-211ENST00000515597 CAPN6Q9Y6Q1 641 aa7.38□□□□□ -1.23
LINC01088-211ENST00000515597 CBX7O95931 251 aa7.37□□□□□ -1.23
LINC01088-211ENST00000515597 CAP2P40123 477 aa7.37□□□□□ -1.23
LINC01088-211ENST00000515597 CCDC85BQ15834 202 aaPredicted RBP7.37□□□□□ -1.23
LINC01088-211ENST00000515597 C22orf34Q6ZV56 151 aa7.37□□□□□ -1.23
LINC01088-211ENST00000515597 HID1Q8IV36 788 aa7.37□□□□□ -1.23
LINC01088-211ENST00000515597 FAM84AQ96KN4 292 aa7.37□□□□□ -1.23
LINC01088-211ENST00000515597 DPH2Q9BQC3 489 aaPredicted RBP7.37□□□□□ -1.23
LINC01088-211ENST00000515597 C19orf73Q9NVV2 129 aa7.37□□□□□ -1.23
LINC01088-211ENST00000515597 EIF4BP23588 611 aaKnown RBP7.36□□□□□ -1.23
LINC01088-211ENST00000515597 AFMP43652 599 aa7.36□□□□□ -1.23
LINC01088-211ENST00000515597 MAP3K11Q16584 847 aa7.36□□□□□ -1.23
LINC01088-211ENST00000515597 MFSD2AQ8NA29 543 aa7.36□□□□□ -1.23
LINC01088-211ENST00000515597 KRTAP4-7Q9BYR0 210 aa7.36□□□□□ -1.23
LINC01088-211ENST00000515597 ST14Q9Y5Y6 855 aa7.36□□□□□ -1.23
LINC01088-211ENST00000515597 SNCAIPQ9Y6H5 919 aa7.36□□□□□ -1.23
LINC01088-211ENST00000515597 CST3P01034 146 aaPredicted RBP7.35□□□□□ -1.23
LINC01088-211ENST00000515597 GNA15P30679 374 aa7.35□□□□□ -1.23
LINC01088-211ENST00000515597 LCE4AQ5TA78 99 aa7.35□□□□□ -1.23
LINC01088-211ENST00000515597 SPOCD1Q6ZMY3 1216 aa7.35□□□□□ -1.23
LINC01088-211ENST00000515597 KIRREL1Q96J84 757 aa7.35□□□□□ -1.23
LINC01088-211ENST00000515597 FAM53CQ9NYF3 392 aa7.35□□□□□ -1.23
LINC01088-211ENST00000515597 PRR23BQ6ZRT6 265 aa7.34□□□□□ -1.23
LINC01088-211ENST00000515597 CDH24Q86UP0 819 aa7.34□□□□□ -1.23
LINC01088-211ENST00000515597 NPAS4Q8IUM7 802 aa7.34□□□□□ -1.23
LINC01088-211ENST00000515597 UBE2FQ969M7 185 aa7.34□□□□□ -1.23
LINC01088-211ENST00000515597 GFRA2O00451 464 aa7.33□□□□□ -1.24
LINC01088-211ENST00000515597 GLI1P08151 1106 aa7.33□□□□□ -1.24
LINC01088-211ENST00000515597 LMNB1P20700 586 aa7.33□□□□□ -1.24
LINC01088-211ENST00000515597 MPZL3Q6UWV2 235 aa7.33□□□□□ -1.24
LINC01088-211ENST00000515597 FRMD6Q96NE9 622 aa7.33□□□□□ -1.24
LINC01088-211ENST00000515597 ZSWIM5Q9P217 1185 aa7.33□□□□□ -1.24
LINC01088-211ENST00000515597 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
LINC01088-211ENST00000515597 PRPF40AO75400 957 aaKnown RBP7.32□□□□□ -1.24
LINC01088-211ENST00000515597 PDIA4P13667 645 aaKnown RBP7.32□□□□□ -1.24
LINC01088-211ENST00000515597 GDNFP39905 211 aa7.32□□□□□ -1.24
LINC01088-211ENST00000515597 LIG3P49916 1009 aa7.32□□□□□ -1.24
LINC01088-211ENST00000515597 RPS26P62854 115 aaKnown RBP7.32□□□□□ -1.24
LINC01088-211ENST00000515597 TNK2Q07912 1038 aa7.32□□□□□ -1.24
LINC01088-211ENST00000515597 ZNF746Q6NUN9 644 aaPredicted RBP7.32□□□□□ -1.24
LINC01088-211ENST00000515597 AGMOQ6ZNB7 445 aa7.32□□□□□ -1.24
LINC01088-211ENST00000515597 DUSP9Q99956 384 aaKnown RBP7.32□□□□□ -1.24
LINC01088-211ENST00000515597 SLAMF8Q9P0V8 285 aa7.32□□□□□ -1.24
LINC01088-211ENST00000515597 PGRP06401 933 aa7.31□□□□□ -1.24
LINC01088-211ENST00000515597 TMEM67Q5HYA8 995 aa7.31□□□□□ -1.24
LINC01088-211ENST00000515597 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
LINC01088-211ENST00000515597 THAP5Q7Z6K1 395 aa7.31□□□□□ -1.24
LINC01088-211ENST00000515597 TMEM87BQ96K49 555 aa7.31□□□□□ -1.24
LINC01088-211ENST00000515597 ALPK1Q96QP1 1244 aa7.31□□□□□ -1.24
LINC01088-211ENST00000515597 AK5Q9Y6K8 562 aa7.31□□□□□ -1.24
LINC01088-211ENST00000515597 TFE3P19532 575 aaPredicted RBP7.3□□□□□ -1.24
LINC01088-211ENST00000515597 RAP1GAPP47736 663 aa7.3□□□□□ -1.24
LINC01088-211ENST00000515597 SYDE1Q6ZW31 735 aaPredicted RBP7.3□□□□□ -1.24
LINC01088-211ENST00000515597 SND1Q7KZF4 910 aaKnown RBP eCLIP7.3□□□□□ -1.24
LINC01088-211ENST00000515597 CILP2Q8IUL8 1156 aa7.3□□□□□ -1.24
LINC01088-211ENST00000515597 AEBP1Q8IUX7 1158 aa7.3□□□□□ -1.24
LINC01088-211ENST00000515597 MRPL41Q8IXM3 137 aaKnown RBP7.3□□□□□ -1.24
LINC01088-211ENST00000515597 MIR1-1HGQ9H1L0 117 aa7.3□□□□□ -1.24
LINC01088-211ENST00000515597 DNAJC25-GNG10A0A024R161 153 aa7.29□□□□□ -1.24
LINC01088-211ENST00000515597 WASH4PA8MWX3 477 aa7.29□□□□□ -1.24
LINC01088-211ENST00000515597 CYP7A1P22680 504 aa7.29□□□□□ -1.24
LINC01088-211ENST00000515597 KIR3DL1P43629 444 aa7.29□□□□□ -1.24
LINC01088-211ENST00000515597 FBLN7Q53RD9 439 aa7.29□□□□□ -1.24
LINC01088-211ENST00000515597 RALGPS1Q5JS13 557 aa7.29□□□□□ -1.24
LINC01088-211ENST00000515597 BHLHE22Q8NFJ8 381 aaPredicted RBP7.29□□□□□ -1.24
LINC01088-211ENST00000515597 DIRC2Q96SL1 478 aa7.29□□□□□ -1.24
LINC01088-211ENST00000515597 KCNK12Q9HB15 430 aa7.29□□□□□ -1.24
LINC01088-211ENST00000515597 TSPAN15O95858 294 aa7.28□□□□□ -1.24
LINC01088-211ENST00000515597 ESR1P03372 595 aa7.28□□□□□ -1.24
LINC01088-211ENST00000515597 ERVFC1P60507 584 aa7.28□□□□□ -1.24
LINC01088-211ENST00000515597 TTC6Q86TZ1 520 aa7.28□□□□□ -1.24
LINC01088-211ENST00000515597 COX4I2Q96KJ9 171 aa7.28□□□□□ -1.24
LINC01088-211ENST00000515597 Q96M66 194 aa7.28□□□□□ -1.24
LINC01088-211ENST00000515597 NSUN3Q9H649 340 aaKnown RBP7.28□□□□□ -1.24
LINC01088-211ENST00000515597 TLR6Q9Y2C9 796 aa7.28□□□□□ -1.24
LINC01088-211ENST00000515597 TACC3Q9Y6A5 838 aa7.28□□□□□ -1.24
LINC01088-211ENST00000515597 ETV3P41162 512 aa7.27□□□□□ -1.25
LINC01088-211ENST00000515597 DNAJB8Q8NHS0 232 aa7.27□□□□□ -1.25
LINC01088-211ENST00000515597 JARID2Q92833 1246 aaPredicted RBP7.27□□□□□ -1.25
LINC01088-211ENST00000515597 ACSF2Q96CM8 615 aaPredicted RBP7.27□□□□□ -1.25
LINC01088-211ENST00000515597 PPP1R16BQ96T49 567 aa7.27□□□□□ -1.25
LINC01088-211ENST00000515597 ANKRD33BA6NCL7 494 aa7.26□□□□□ -1.25
LINC01088-211ENST00000515597 F6X3S4 739 aa7.26□□□□□ -1.25
LINC01088-211ENST00000515597 CFPP27918 469 aa7.26□□□□□ -1.25
LINC01088-211ENST00000515597 HK2P52789 917 aa7.26□□□□□ -1.25
LINC01088-211ENST00000515597 RPL6Q02878 288 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 877.1 ms