RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 USP17L5A8MUK1 530 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 TRPA1O75762 1119 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 ALDH1A1P00352 501 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 GABPAQ06546 454 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 RRP1BQ14684 758 aaKnown RBP31.02■■■□□ 2.56
DDR1-279ENST00000515529 SBK1Q52WX2 424 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 CWC27Q6UX04 472 aaKnown RBP31.02■■■□□ 2.56
DDR1-279ENST00000515529 IFNL1Q8IU54 200 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 MS4A4AQ96JQ5 239 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 AS3MTQ9HBK9 375 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 EPB41L4AQ9HCS5 686 aaPredicted RBP31.02■■■□□ 2.56
DDR1-279ENST00000515529 CABP5Q9NP86 173 aa31.02■■■□□ 2.56
DDR1-279ENST00000515529 CXCL11O14625 94 aa31.01■■■□□ 2.55
DDR1-279ENST00000515529 SHMT1P34896 483 aa31.01■■■□□ 2.55
DDR1-279ENST00000515529 DYNLL2Q96FJ2 89 aa31.01■■■□□ 2.55
DDR1-279ENST00000515529 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.01■■■□□ 2.55
DDR1-279ENST00000515529 KCNH4Q9UQ05 1017 aa31.01■■■□□ 2.55
DDR1-279ENST00000515529 CCDC171Q6TFL3 1326 aa31■■■□□ 2.55
DDR1-279ENST00000515529 EVX2Q03828 476 aa31■■■□□ 2.55
DDR1-279ENST00000515529 ABCB5Q2M3G0 1257 aa31■■■□□ 2.55
DDR1-279ENST00000515529 ZBTB21Q9ULJ3 1066 aa31■■■□□ 2.55
DDR1-279ENST00000515529 TESPA1A2RU30 521 aaPredicted RBP30.99■■■□□ 2.55
DDR1-279ENST00000515529 TRIM75PA6NK02 468 aa30.99■■■□□ 2.55
DDR1-279ENST00000515529 GH2P01242 217 aa30.99■■■□□ 2.55
DDR1-279ENST00000515529 CCDC84Q86UT8 332 aaPredicted RBP30.99■■■□□ 2.55
DDR1-279ENST00000515529 BRI3BPQ8WY22 251 aa30.99■■■□□ 2.55
DDR1-279ENST00000515529 AFG3L2Q9Y4W6 797 aa30.99■■■□□ 2.55
DDR1-279ENST00000515529 MPHOSPH10O00566 681 aaKnown RBP30.98■■■□□ 2.55
DDR1-279ENST00000515529 C16orf86Q6ZW13 317 aa30.98■■■□□ 2.55
DDR1-279ENST00000515529 SLC44A5Q8NCS7 719 aa30.98■■■□□ 2.55
DDR1-279ENST00000515529 TSKSQ9UJT2 592 aa30.98■■■□□ 2.55
DDR1-279ENST00000515529 ATAD5Q96QE3 1844 aa30.97■■■□□ 2.55
DDR1-279ENST00000515529 IGF2BP3O00425 579 aaKnown RBP eCLIP30.97■■■□□ 2.55
DDR1-279ENST00000515529 SLC3A2P08195 630 aaKnown RBP30.97■■■□□ 2.55
DDR1-279ENST00000515529 CDK8P49336 464 aa30.97■■■□□ 2.55
DDR1-279ENST00000515529 ZNF589Q86UQ0 364 aaPredicted RBP30.97■■■□□ 2.55
DDR1-279ENST00000515529 ZNF280CQ8ND82 737 aa30.97■■■□□ 2.55
DDR1-279ENST00000515529 RUFY2Q8WXA3 655 aa30.97■■■□□ 2.55
DDR1-279ENST00000515529 ZNF287Q9HBT7 754 aa30.97■■■□□ 2.55
DDR1-279ENST00000515529 PCNTO95613 3336 aa30.96■■■□□ 2.55
DDR1-279ENST00000515529 SPP2Q13103 211 aa30.96■■■□□ 2.55
DDR1-279ENST00000515529 RAB3GAP1Q15042 981 aa30.96■■■□□ 2.55
DDR1-279ENST00000515529 VPS53Q5VIR6 699 aa30.96■■■□□ 2.55
DDR1-279ENST00000515529 SKAP1Q86WV1 359 aa30.96■■■□□ 2.55
DDR1-279ENST00000515529 MKNK2Q9HBH9 465 aa30.96■■■□□ 2.55
DDR1-279ENST00000515529 HSPA8P11142 646 aaKnown RBP30.95■■■□□ 2.55
DDR1-279ENST00000515529 FASTKD5Q7L8L6 764 aaKnown RBP30.95■■■□□ 2.55
DDR1-279ENST00000515529 STK11IPQ8N1F8 1099 aa30.95■■■□□ 2.55
DDR1-279ENST00000515529 PTPN18Q99952 460 aa30.95■■■□□ 2.55
DDR1-279ENST00000515529 LAMB1P07942 1786 aa30.94■■■□□ 2.54
DDR1-279ENST00000515529 A0A0G2JLL6 359 aaPredicted RBP30.94■■■□□ 2.54
DDR1-279ENST00000515529 JAG1P78504 1218 aa30.94■■■□□ 2.54
DDR1-279ENST00000515529 SHROOM1Q2M3G4 852 aaPredicted RBP30.94■■■□□ 2.54
DDR1-279ENST00000515529 GADL1Q6ZQY3 521 aa30.94■■■□□ 2.54
DDR1-279ENST00000515529 PRRT2Q7Z6L0 340 aaPredicted RBP30.94■■■□□ 2.54
DDR1-279ENST00000515529 CCDC17Q96LX7 622 aa30.94■■■□□ 2.54
DDR1-279ENST00000515529 SMIM22K7EJ46 135 aa30.93■■■□□ 2.54
DDR1-279ENST00000515529 HSPD1P10809 573 aaKnown RBP30.93■■■□□ 2.54
DDR1-279ENST00000515529 LBX1P52954 281 aa30.93■■■□□ 2.54
DDR1-279ENST00000515529 WDR18Q9BV38 432 aa30.93■■■□□ 2.54
DDR1-279ENST00000515529 ROBO3Q96MS0 1386 aa30.92■■■□□ 2.54
DDR1-279ENST00000515529 BTBD19C9JJ37 291 aa30.92■■■□□ 2.54
DDR1-279ENST00000515529 TBC1D8O95759 1140 aa30.92■■■□□ 2.54
DDR1-279ENST00000515529 PPARAQ07869 468 aa30.92■■■□□ 2.54
DDR1-279ENST00000515529 ALX1Q15699 326 aa30.92■■■□□ 2.54
DDR1-279ENST00000515529 RAD50Q92878 1312 aa30.92■■■□□ 2.54
DDR1-279ENST00000515529 CHMLP26374 656 aa30.91■■■□□ 2.54
DDR1-279ENST00000515529 PDE4BQ07343 736 aa30.91■■■□□ 2.54
DDR1-279ENST00000515529 TAF1CQ15572 869 aaPredicted RBP30.91■■■□□ 2.54
DDR1-279ENST00000515529 BMP2KLQ5H9B9 411 aa30.91■■■□□ 2.54
DDR1-279ENST00000515529 TMEM179Q6ZVK1 233 aa30.91■■■□□ 2.54
DDR1-279ENST00000515529 FAM43AQ8N2R8 423 aa30.91■■■□□ 2.54
DDR1-279ENST00000515529 FEZ1Q99689 392 aa30.91■■■□□ 2.54
DDR1-279ENST00000515529 ZCCHC17Q9NP64 241 aaKnown RBP30.91■■■□□ 2.54
DDR1-279ENST00000515529 FOXP2O15409 715 aa30.9■■■□□ 2.54
DDR1-279ENST00000515529 ANKRD23Q86SG2 305 aa30.9■■■□□ 2.54
DDR1-279ENST00000515529 TMOD4Q9NZQ9 345 aa30.9■■■□□ 2.54
DDR1-279ENST00000515529 USP17L10C9JJH3 530 aa30.89■■■□□ 2.54
DDR1-279ENST00000515529 AKR1B1P15121 316 aa30.89■■■□□ 2.54
DDR1-279ENST00000515529 HMGCS2P54868 508 aa30.89■■■□□ 2.54
DDR1-279ENST00000515529 MTMR2Q13614 643 aa30.89■■■□□ 2.54
DDR1-279ENST00000515529 SEPT2Q15019 361 aa30.89■■■□□ 2.54
DDR1-279ENST00000515529 ZFYVE28Q9HCC9 887 aa30.89■■■□□ 2.54
DDR1-279ENST00000515529 PHIPQ8WWQ0 1821 aa30.89■■■□□ 2.53
DDR1-279ENST00000515529 MYH8P13535 1937 aa30.88■■■□□ 2.53
DDR1-279ENST00000515529 C19orf81C9J6K1 198 aa30.88■■■□□ 2.53
DDR1-279ENST00000515529 FGAP02671 866 aa30.88■■■□□ 2.53
DDR1-279ENST00000515529 BACE1P56817 501 aa30.88■■■□□ 2.53
DDR1-279ENST00000515529 ZNF444Q8N0Y2 327 aaPredicted RBP30.88■■■□□ 2.53
DDR1-279ENST00000515529 CFHR5Q9BXR6 569 aa30.88■■■□□ 2.53
DDR1-279ENST00000515529 ZMYM6O95789 1325 aa30.88■■■□□ 2.53
DDR1-279ENST00000515529 PDHXO00330 501 aa30.87■■■□□ 2.53
DDR1-279ENST00000515529 PROCA1Q8NCQ7 364 aaPredicted RBP30.87■■■□□ 2.53
DDR1-279ENST00000515529 PRDM10Q9NQV6 1147 aa30.87■■■□□ 2.53
DDR1-279ENST00000515529 CRHR2Q13324 411 aa30.86■■■□□ 2.53
DDR1-279ENST00000515529 MOGSQ13724 837 aa30.86■■■□□ 2.53
DDR1-279ENST00000515529 PRDM1O75626 825 aa30.85■■■□□ 2.53
DDR1-279ENST00000515529 RASA1P20936 1047 aa30.85■■■□□ 2.53
DDR1-279ENST00000515529 CTDSPL2Q05D32 466 aa30.85■■■□□ 2.53
DDR1-279ENST00000515529 DSCC1Q9BVC3 393 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms