RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 GMLQ99445 158 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 GJB4Q9NTQ9 266 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 SERPINA10Q9UK55 444 aa10.71□□□□□ -0.69
CPNE4-213ENST00000515418 FOCADQ5VW36 1801 aa10.71□□□□□ -0.7
CPNE4-213ENST00000515418 SHTN1A0MZ66 631 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 GOLGA8AA7E2F4 631 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 DHX16O60231 1041 aaKnown RBP10.7□□□□□ -0.7
CPNE4-213ENST00000515418 RASA1P20936 1047 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 HDLBPQ00341 1268 aaKnown RBP10.7□□□□□ -0.7
CPNE4-213ENST00000515418 IFIT1BQ5T764 474 aaKnown RBP10.7□□□□□ -0.7
CPNE4-213ENST00000515418 OTUD7BQ6GQQ9 843 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 C16orf86Q6ZW13 317 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 ZNF654Q8IZM8 581 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 JDP2Q8WYK2 163 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 VPS33BQ9H267 617 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 GDPD2Q9HCC8 539 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 ECM29Q5VYK3 1845 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 PRPF40AO75400 957 aaKnown RBP10.7□□□□□ -0.7
CPNE4-213ENST00000515418 PDCP20941 246 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 NTRK3Q16288 839 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 RCSD1Q6JBY9 416 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 FANCBQ8NB91 859 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 AIFM3Q96NN9 605 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 MTA3Q9BTC8 594 aa10.7□□□□□ -0.7
CPNE4-213ENST00000515418 FHDC1Q9C0D6 1143 aaPredicted RBP10.7□□□□□ -0.7
CPNE4-213ENST00000515418 OSBPL5Q9H0X9 879 aaPredicted RBP10.7□□□□□ -0.7
CPNE4-213ENST00000515418 ORC3Q9UBD5 711 aaPredicted RBP10.7□□□□□ -0.7
CPNE4-213ENST00000515418 ROBO3Q96MS0 1386 aa10.69□□□□□ -0.7
CPNE4-213ENST00000515418 DDTLA6NHG4 134 aaPredicted RBP10.69□□□□□ -0.7
CPNE4-213ENST00000515418 H3BQV1 296 aa10.69□□□□□ -0.7
CPNE4-213ENST00000515418 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
CPNE4-213ENST00000515418 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
CPNE4-213ENST00000515418 HMGN5P82970 282 aaKnown RBP10.69□□□□□ -0.7
CPNE4-213ENST00000515418 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
CPNE4-213ENST00000515418 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
CPNE4-213ENST00000515418 TTC6Q86TZ1 520 aa10.69□□□□□ -0.7
CPNE4-213ENST00000515418 PSME4Q14997 1843 aa10.69□□□□□ -0.7
CPNE4-213ENST00000515418 CLRN2A0PK11 232 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 FAM196BA6NMK8 535 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 TRAK2O60296 914 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 RTN1Q16799 776 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 ZSCAN29Q8IWY8 852 aaPredicted RBP10.68□□□□□ -0.7
CPNE4-213ENST00000515418 OGFOD1Q8N543 542 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 DDX60LQ5H9U9 1706 aaKnown RBP10.68□□□□□ -0.7
CPNE4-213ENST00000515418 DDX11L8A8MPP1 907 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 GUCY1A2P33402 732 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 DNM1Q05193 864 aaKnown RBP10.68□□□□□ -0.7
CPNE4-213ENST00000515418 GABPAQ06546 454 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 TROAPQ12815 778 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 DLGAP5Q15398 846 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 CIAPIN1Q6FI81 312 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 ARHGAP27Q6ZUM4 889 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 CATIPQ7Z7H3 387 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 LMBRD1Q9NUN5 540 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 SCAF8Q9UPN6 1271 aaKnown RBP10.68□□□□□ -0.7
CPNE4-213ENST00000515418 CNPY2Q9Y2B0 182 aa10.68□□□□□ -0.7
CPNE4-213ENST00000515418 hCG_1642624A0A1W2PR95 340 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 TCP10L2B9ZVM9 353 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 NCLP19338 710 aaKnown RBP10.67□□□□□ -0.7
CPNE4-213ENST00000515418 RBM26Q5T8P6 1007 aaKnown RBP10.67□□□□□ -0.7
CPNE4-213ENST00000515418 IDI2Q9BXS1 227 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 SLC26A6Q9BXS9 759 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 GZF1Q9H116 711 aaPredicted RBP10.67□□□□□ -0.7
CPNE4-213ENST00000515418 ZNF287Q9HBT7 754 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 TFIP11Q9UBB9 837 aaKnown RBP10.67□□□□□ -0.7
CPNE4-213ENST00000515418 SERPINB13Q9UIV8 391 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 STX8Q9UNK0 236 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 MYO3BQ8WXR4 1341 aa10.67□□□□□ -0.7
CPNE4-213ENST00000515418 GOLGA6L22H0YM25 854 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 AKR1B1P15121 316 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 USP48Q86UV5 1035 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 CRACR2BQ8N4Y2 399 aaPredicted RBP10.66□□□□□ -0.7
CPNE4-213ENST00000515418 AGBL3Q8NEM8 1001 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 NEDD1Q8NHV4 660 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
CPNE4-213ENST00000515418 HDAC9Q9UKV0 1011 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 GJA3Q9Y6H8 435 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 CDKL5O76039 1030 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 PLEKHA8P1O95397 391 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 EGFRP00533 1210 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 IFNAR1P17181 557 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 SHMT1P34896 483 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 SSRP1Q08945 709 aaKnown RBP10.66□□□□□ -0.7
CPNE4-213ENST00000515418 SHROOM1Q2M3G4 852 aaPredicted RBP10.66□□□□□ -0.7
CPNE4-213ENST00000515418 NBPF9Q3BBW0 867 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 CPLX2Q6PUV4 134 aaKnown RBP10.66□□□□□ -0.7
CPNE4-213ENST00000515418 RASGRP2Q7LDG7 609 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 DGKHQ86XP1 1220 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 CEP95Q96GE4 821 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 C8orf76Q96K31 380 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 TMEM47Q9BQJ4 181 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 DNAJC18Q9H819 358 aa10.66□□□□□ -0.7
CPNE4-213ENST00000515418 KAT14Q9H8E8 782 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms