RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 ACSF2Q96CM8 615 aaPredicted RBP6.17□□□□□ -1.42
MBD4-210ENST00000515266 TMEM87BQ96K49 555 aa6.17□□□□□ -1.42
MBD4-210ENST00000515266 SUPT16HQ9Y5B9 1047 aaKnown RBP6.17□□□□□ -1.42
MBD4-210ENST00000515266 PRR36Q9H6K5 1346 aa6.17□□□□□ -1.42
MBD4-210ENST00000515266 PLCG1P19174 1290 aa6.16□□□□□ -1.42
MBD4-210ENST00000515266 SLC6A19Q695T7 634 aa6.16□□□□□ -1.42
MBD4-210ENST00000515266 MFSD2AQ8NA29 543 aa6.16□□□□□ -1.42
MBD4-210ENST00000515266 MIPEPQ99797 713 aa6.16□□□□□ -1.42
MBD4-210ENST00000515266 BSDC1Q9NW68 430 aaPredicted RBP6.16□□□□□ -1.42
MBD4-210ENST00000515266 IGF2BP3O00425 579 aaKnown RBP eCLIP6.15□□□□□ -1.42
MBD4-210ENST00000515266 SCAMP3O14828 347 aaKnown RBP6.15□□□□□ -1.42
MBD4-210ENST00000515266 GRIN3BO60391 1043 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 ZNF394Q53GI3 561 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 TMEM201Q5SNT2 666 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 LETMD1Q6P1Q0 360 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 USP48Q86UV5 1035 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 VSIG10LQ86VR7 867 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 MCATQ8IVS2 390 aaKnown RBP6.15□□□□□ -1.42
MBD4-210ENST00000515266 PLD6Q8N2A8 252 aaKnown RBP6.15□□□□□ -1.42
MBD4-210ENST00000515266 RNF34Q969K3 372 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 DPH2Q9BQC3 489 aaPredicted RBP6.15□□□□□ -1.42
MBD4-210ENST00000515266 MKNK2Q9HBH9 465 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 PLAGL2Q9UPG8 496 aa6.15□□□□□ -1.42
MBD4-210ENST00000515266 ROBO2Q9HCK4 1378 aa6.15□□□□□ -1.43
MBD4-210ENST00000515266 DNAJA2O60884 412 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 HTR3BO95264 441 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 CEACAM5P06731 702 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 CWF19L2Q2TBE0 894 aaKnown RBP6.14□□□□□ -1.43
MBD4-210ENST00000515266 NBPF11Q86T75 865 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 METTL16Q86W50 562 aaKnown RBP6.14□□□□□ -1.43
MBD4-210ENST00000515266 WFDC3Q8IUB2 231 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 RIN3Q8TB24 985 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 NETO1Q8TDF5 533 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 XAGE3Q8WTP9 111 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 BRMS1Q9HCU9 246 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 UBP1Q9NZI7 540 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 REV1Q9UBZ9 1251 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 CCDC39Q9UFE4 941 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 GTF2IRD1Q9UHL9 959 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 PCDHGB7Q9Y5F8 929 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 CNTNAP4Q9C0A0 1308 aa6.14□□□□□ -1.43
MBD4-210ENST00000515266 UPK3BL1B0FP48 263 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 UPK3BL2E5RIL1 263 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 RBAK-RBAKDNI3L0D1 243 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 ITIH2P19823 946 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 KIAA0825Q8IV33 1275 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 FAM13CQ8NE31 585 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 DNAJB8Q8NHS0 232 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 EAF1Q96JC9 268 aaPredicted RBP6.13□□□□□ -1.43
MBD4-210ENST00000515266 SPON2Q9BUD6 331 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 NT5C1AQ9BXI3 368 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 TNKS2Q9H2K2 1166 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 PRDM5Q9NQX1 630 aaPredicted RBP6.13□□□□□ -1.43
MBD4-210ENST00000515266 DDX41Q9UJV9 622 aaKnown RBP6.13□□□□□ -1.43
MBD4-210ENST00000515266 MAPK8IP1Q9UQF2 711 aa6.13□□□□□ -1.43
MBD4-210ENST00000515266 WNT11O96014 354 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 RACK1P63244 317 aaKnown RBP6.12□□□□□ -1.43
MBD4-210ENST00000515266 HDLBPQ00341 1268 aaKnown RBP6.12□□□□□ -1.43
MBD4-210ENST00000515266 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 IFI16Q16666 785 aaKnown RBP6.12□□□□□ -1.43
MBD4-210ENST00000515266 NKPD1Q17RQ9 610 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 SEZ6Q53EL9 994 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 C22orf34Q6ZV56 151 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 SPACA3Q8IXA5 215 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 CYB5D2Q8WUJ1 264 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 BCL7CQ8WUZ0 217 aaPredicted RBP6.12□□□□□ -1.43
MBD4-210ENST00000515266 ZNF428Q96B54 188 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 PODXL2Q9NZ53 605 aa6.12□□□□□ -1.43
MBD4-210ENST00000515266 TPX2Q9ULW0 747 aaKnown RBP6.12□□□□□ -1.43
MBD4-210ENST00000515266 PRR33A8MZF0 331 aa6.11□□□□□ -1.43
MBD4-210ENST00000515266 CHURC1-FNTBB4DL54 471 aa6.11□□□□□ -1.43
MBD4-210ENST00000515266 GP2P55259 537 aaKnown RBP6.11□□□□□ -1.43
MBD4-210ENST00000515266 ARHGAP27Q6ZUM4 889 aa6.11□□□□□ -1.43
MBD4-210ENST00000515266 SLITRK4Q8IW52 837 aa6.11□□□□□ -1.43
MBD4-210ENST00000515266 SLFN12Q8IYM2 578 aa6.11□□□□□ -1.43
MBD4-210ENST00000515266 PPP1R13LQ8WUF5 828 aa6.11□□□□□ -1.43
MBD4-210ENST00000515266 ANGEL1Q9UNK9 670 aaKnown RBP6.11□□□□□ -1.43
MBD4-210ENST00000515266 PCDHB14Q9Y5E9 798 aa6.11□□□□□ -1.43
MBD4-210ENST00000515266 OAS3Q9Y6K5 1087 aaKnown RBP6.11□□□□□ -1.43
MBD4-210ENST00000515266 GNAT3A8MTJ3 354 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 ATE1O95260 518 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 ZNF865P0CJ78 1059 aaPredicted RBP6.1□□□□□ -1.43
MBD4-210ENST00000515266 YARSP54577 528 aaKnown RBP6.1□□□□□ -1.43
MBD4-210ENST00000515266 SFRP5Q5T4F7 317 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 ZNF746Q6NUN9 644 aaPredicted RBP6.1□□□□□ -1.43
MBD4-210ENST00000515266 ZNF574Q6ZN55 896 aaPredicted RBP6.1□□□□□ -1.43
MBD4-210ENST00000515266 SPRED2Q7Z698 418 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 CDH24Q86UP0 819 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 FLCNQ8NFG4 579 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 MISP3Q96FF7 219 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 EHMT1Q9H9B1 1298 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 PAK6Q9NQU5 681 aaPredicted RBP6.1□□□□□ -1.43
MBD4-210ENST00000515266 KLHL3Q9UH77 587 aa6.1□□□□□ -1.43
MBD4-210ENST00000515266 TMEM265A0A087WTH1 108 aa6.09□□□□□ -1.43
MBD4-210ENST00000515266 PRKCQQ04759 706 aa6.09□□□□□ -1.43
MBD4-210ENST00000515266 CLCQ05315 142 aa6.09□□□□□ -1.43
MBD4-210ENST00000515266 BNIP3Q12983 259 aa6.09□□□□□ -1.43
MBD4-210ENST00000515266 C9orf131Q5VYM1 1079 aa6.09□□□□□ -1.43
MBD4-210ENST00000515266 NT5DC4Q86YG4 428 aa6.09□□□□□ -1.43
MBD4-210ENST00000515266 ZNF654Q8IZM8 581 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms