RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
TRIM41-207ENST00000515223 LZTFL1Q9NQ48 299 aa17.88■□□□□ 0.45
TRIM41-207ENST00000515223 GUCA1BQ9UMX6 200 aa17.88■□□□□ 0.45
TRIM41-207ENST00000515223 PRDM1O75626 825 aa17.87■□□□□ 0.45
TRIM41-207ENST00000515223 STK10O94804 968 aaKnown RBP17.87■□□□□ 0.45
TRIM41-207ENST00000515223 ARHGEF6Q15052 776 aa17.87■□□□□ 0.45
TRIM41-207ENST00000515223 ABCA5Q8WWZ7 1642 aa17.87■□□□□ 0.45
TRIM41-207ENST00000515223 CFBP00751 764 aa17.87■□□□□ 0.45
TRIM41-207ENST00000515223 ERCC5P28715 1186 aaPredicted RBP17.87■□□□□ 0.45
TRIM41-207ENST00000515223 KRT9P35527 623 aa17.87■□□□□ 0.45
TRIM41-207ENST00000515223 RPS8P62241 208 aaKnown RBP17.87■□□□□ 0.45
TRIM41-207ENST00000515223 NOC4LQ9BVI4 516 aaKnown RBP17.87■□□□□ 0.45
TRIM41-207ENST00000515223 DNM3Q9UQ16 869 aa17.87■□□□□ 0.45
TRIM41-207ENST00000515223 ARID4AP29374 1257 aaPredicted RBP17.87■□□□□ 0.45
TRIM41-207ENST00000515223 NSMCE1Q8WV22 266 aa17.87■□□□□ 0.45
TRIM41-207ENST00000515223 TSGA10Q9BZW7 698 aa17.87■□□□□ 0.45
TRIM41-207ENST00000515223 HSPA4P34932 840 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 CFAP157Q5JU67 520 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.86■□□□□ 0.45
TRIM41-207ENST00000515223 NLRX1Q86UT6 975 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 NAP1L3Q99457 506 aaPredicted RBP17.86■□□□□ 0.45
TRIM41-207ENST00000515223 DDX39AO00148 427 aaKnown RBP17.86■□□□□ 0.45
TRIM41-207ENST00000515223 GNPTABQ3T906 1256 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 MAPKAPK5Q8IW41 473 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 VPS18Q9P253 973 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 TBC1D8BQ0IIM8 1120 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 GLG1Q92896 1179 aa17.86■□□□□ 0.45
TRIM41-207ENST00000515223 CHL1O00533 1208 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 USH1GQ495M9 461 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 CEP128Q6ZU80 1094 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 CCDC25Q86WR0 208 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 GPR161Q8N6U8 529 aaKnown RBP17.85■□□□□ 0.45
TRIM41-207ENST00000515223 MBD5Q9P267 1494 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 SPATA5Q8NB90 893 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 ZNF594Q96JF6 807 aaPredicted RBP17.85■□□□□ 0.45
TRIM41-207ENST00000515223 LRWD1Q9UFC0 647 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 SYNMO15061 1565 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 GMNNO75496 209 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 VAV2P52735 878 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 LRMPQ12912 555 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 FAM47CQ5HY64 1035 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 ARHGAP27Q6ZUM4 889 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 USP40Q9NVE5 1235 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 ERVV-2B6SEH9 535 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 KLHDC4Q8TBB5 520 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 PLEKHF1Q96S99 279 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 TTF2Q9UNY4 1162 aaKnown RBP17.85■□□□□ 0.45
TRIM41-207ENST00000515223 GTF2IP78347 998 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 KMT5BQ4FZB7 885 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 SULF1Q8IWU6 871 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 SNX29Q8TEQ0 813 aa17.85■□□□□ 0.45
TRIM41-207ENST00000515223 NCOA5Q9HCD5 579 aaKnown RBP17.85■□□□□ 0.45
TRIM41-207ENST00000515223 RHOXF2BP0C7M4 288 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 CAPN2P17655 700 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 TGFBRAP1Q8WUH2 860 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 RHOXF2Q9BQY4 288 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRIM41-207ENST00000515223 TICAM2Q86XR7 235 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 FNBP4Q8N3X1 1017 aaPredicted RBP17.84■□□□□ 0.45
TRIM41-207ENST00000515223 ATRIPQ8WXE1 791 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 CNKSR1Q969H4 720 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 TRIM7Q9C029 511 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 NR1I2O75469 434 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 MYL5Q02045 173 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 FAM160A1Q05DH4 1040 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 OTUD7BQ6GQQ9 843 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 ANKS4BQ8N8V4 417 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 DCPSQ96C86 337 aaKnown RBP17.84■□□□□ 0.45
TRIM41-207ENST00000515223 CRCPO75575 148 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 GEN1Q17RS7 908 aa17.84■□□□□ 0.45
TRIM41-207ENST00000515223 JAK2O60674 1132 aa17.83■□□□□ 0.45
TRIM41-207ENST00000515223 MFSD14BQ5SR56 506 aa17.83■□□□□ 0.45
TRIM41-207ENST00000515223 SELENOSQ9BQE4 189 aa17.83■□□□□ 0.45
TRIM41-207ENST00000515223 PAGR1Q9BTK6 254 aa17.83■□□□□ 0.45
TRIM41-207ENST00000515223 EVCP57679 992 aa17.83■□□□□ 0.45
TRIM41-207ENST00000515223 TTC38Q5R3I4 469 aa17.83■□□□□ 0.45
TRIM41-207ENST00000515223 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.45
TRIM41-207ENST00000515223 ATP2C2O75185 946 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 HERC4Q5GLZ8 1057 aaPredicted RBP17.83■□□□□ 0.44
TRIM41-207ENST00000515223 MAEAQ7L5Y9 396 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 OTUD6AQ7L8S5 288 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 CCDC26Q8TAB7 109 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 PNMA2Q9UL42 364 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 PYCARDQ9ULZ3 195 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 ME3Q16798 604 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 ARFGAP2Q8N6H7 521 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 KBTBD3Q8NAB2 608 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 CAPZA3Q96KX2 299 aa17.83■□□□□ 0.44
TRIM41-207ENST00000515223 RIOK1Q9BRS2 568 aaKnown RBP17.83■□□□□ 0.44
TRIM41-207ENST00000515223 LLPHQ9BRT6 129 aaKnown RBP17.83■□□□□ 0.44
TRIM41-207ENST00000515223 P4HA1P13674 534 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 TBC1D31Q96DN5 1066 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 TLDC2A0PJX2 215 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 GIPC1O14908 333 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 KRT19P08727 400 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 CD19P15391 556 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 PPP1R21Q6ZMI0 780 aa17.82■□□□□ 0.44
TRIM41-207ENST00000515223 C2CD5Q86YS7 1000 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms