RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 FOXD4L6Q3SYB3 417 aaPredicted RBP7.34□□□□□ -1.23
RFC1-216ENST00000514572 ZBTB37Q5TC79 503 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 FOXD4L3Q6VB84 417 aaPredicted RBP7.34□□□□□ -1.23
RFC1-216ENST00000514572 ZSWIM2Q8NEG5 633 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 SPATA9Q9BWV2 254 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 COL25A1Q9BXS0 654 aaPredicted RBP7.34□□□□□ -1.23
RFC1-216ENST00000514572 PLAAQ9Y263 795 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 HIF3AQ9Y2N7 669 aa7.34□□□□□ -1.23
RFC1-216ENST00000514572 PRAMEF27A3QJZ7 478 aa7.33□□□□□ -1.24
RFC1-216ENST00000514572 DEAF1O75398 565 aaPredicted RBP7.33□□□□□ -1.24
RFC1-216ENST00000514572 PGRP06401 933 aa7.33□□□□□ -1.24
RFC1-216ENST00000514572 HP1BP3Q5SSJ5 553 aaPredicted RBP7.33□□□□□ -1.24
RFC1-216ENST00000514572 CHSY3Q70JA7 882 aa7.33□□□□□ -1.24
RFC1-216ENST00000514572 C12orf40Q86WS4 652 aa7.33□□□□□ -1.24
RFC1-216ENST00000514572 MCATQ8IVS2 390 aaKnown RBP7.33□□□□□ -1.24
RFC1-216ENST00000514572 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
RFC1-216ENST00000514572 ZBTB38Q8NAP3 1195 aaPredicted RBP7.33□□□□□ -1.24
RFC1-216ENST00000514572 STAG1Q8WVM7 1258 aa7.33□□□□□ -1.24
RFC1-216ENST00000514572 USP26Q9BXU7 913 aa7.33□□□□□ -1.24
RFC1-216ENST00000514572 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
RFC1-216ENST00000514572 PCDHB10Q9UN67 800 aa7.33□□□□□ -1.24
RFC1-216ENST00000514572 FANCGO15287 622 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 DDX3YO15523 660 aaKnown RBP7.32□□□□□ -1.24
RFC1-216ENST00000514572 ASMTLO95671 621 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 POLR2BP30876 1174 aaKnown RBP7.32□□□□□ -1.24
RFC1-216ENST00000514572 NLRP12P59046 1061 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 ZC3H12BQ5HYM0 836 aaKnown RBP7.32□□□□□ -1.24
RFC1-216ENST00000514572 SGSM3Q96HU1 749 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 METTL14Q9HCE5 456 aaKnown RBP7.32□□□□□ -1.24
RFC1-216ENST00000514572 LRRC4BQ9NT99 713 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 SUSD2Q9UGT4 822 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 KLHL3Q9UH77 587 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 CD2APQ9Y5K6 639 aa7.32□□□□□ -1.24
RFC1-216ENST00000514572 FAM181BA6NEQ2 426 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 ZNF143P52747 638 aaPredicted RBP7.31□□□□□ -1.24
RFC1-216ENST00000514572 SLC7A5Q01650 507 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 TM4SF20Q53R12 229 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 TAF7LQ5H9L4 462 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 PPM1JQ5JR12 505 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 KIAA1211LQ6NV74 962 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 KRT26Q7Z3Y9 468 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 PPFIBP1Q86W92 1011 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 SLC26A8Q96RN1 970 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 CRIM1Q9NZV1 1036 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 KLHL42Q9P2K6 505 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 PPP1R9AQ9ULJ8 1098 aa7.31□□□□□ -1.24
RFC1-216ENST00000514572 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 RGS13O14921 159 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 OIP5O43482 229 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 UBOX5O94941 541 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 CAPNS1P04632 268 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 SLFN14P0C7P3 912 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 HOXB4P17483 251 aaPredicted RBP7.3□□□□□ -1.24
RFC1-216ENST00000514572 CD68P34810 354 aaPredicted RBP7.3□□□□□ -1.24
RFC1-216ENST00000514572 CAP2P40123 477 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 PMS1P54277 932 aaKnown RBP7.3□□□□□ -1.24
RFC1-216ENST00000514572 ID3Q02535 119 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 TMEM192Q8IY95 271 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 LRRC47Q8N1G4 583 aaKnown RBP7.3□□□□□ -1.24
RFC1-216ENST00000514572 DTWD1Q8N5C7 304 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 EDARADDQ8WWZ3 215 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 KISS1RQ969F8 398 aaPredicted RBP7.3□□□□□ -1.24
RFC1-216ENST00000514572 TMEM87BQ96K49 555 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 BTBD6Q96KE9 485 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 TMPRSS13Q9BYE2 586 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 FBRSQ9HAH7 460 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 CSADQ9Y600 493 aa7.3□□□□□ -1.24
RFC1-216ENST00000514572 KCNQ2O43526 872 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 MARCH6O60337 910 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 ADAMTS2O95450 1211 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 RAG1P15918 1043 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 POU3F3P20264 500 aaPredicted RBP7.29□□□□□ -1.24
RFC1-216ENST00000514572 ETF1P62495 437 aaKnown RBP7.29□□□□□ -1.24
RFC1-216ENST00000514572 PLEKHG6Q3KR16 790 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 FOXB2Q5VYV0 432 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 SLC6A19Q695T7 634 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 ZNF513Q8N8E2 541 aaPredicted RBP7.29□□□□□ -1.24
RFC1-216ENST00000514572 UBASH3BQ8TF42 649 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 NINJ1Q92982 152 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 IRF2BPLQ9H1B7 796 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
RFC1-216ENST00000514572 ARHGEF4Q9NR80 690 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 DISC1Q9NRI5 854 aa7.29□□□□□ -1.24
RFC1-216ENST00000514572 TYW1Q9NV66 732 aaKnown RBP7.29□□□□□ -1.24
RFC1-216ENST00000514572 DDX56Q9NY93 547 aaKnown RBP7.29□□□□□ -1.24
RFC1-216ENST00000514572 SUCOQ9UBS9 1254 aaKnown RBP7.29□□□□□ -1.24
RFC1-216ENST00000514572 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 IQCA1LA6NCM1 817 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 DLL1O00548 723 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 RFPL3O75679 317 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 NEFMP07197 916 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 SLURP2P0DP57 97 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 YARSP54577 528 aaKnown RBP7.28□□□□□ -1.24
RFC1-216ENST00000514572 NKG7Q16617 165 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 BBS9Q3SYG4 887 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 GNPTABQ3T906 1256 aa7.28□□□□□ -1.24
RFC1-216ENST00000514572 EXOSC6Q5RKV6 272 aaKnown RBP7.28□□□□□ -1.24
RFC1-216ENST00000514572 THNSL2Q86YJ6 484 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms