RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, human

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-222	ENST00000514515	CABLES1	Q8TDN4	633 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	EPSTI1	Q96J88	318 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	PANX2	Q96RD6	677 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	CTAGE1	Q96RT6	745 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	TTF2	Q9UNY4	1162 aa	Known RBP	7.16	□□□□□ -1.26
NREP-222	ENST00000514515	CTNND2	Q9UQB3	1225 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	ZNF532	Q9HCE3	1301 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	IPO7	O95373	1038 aa	Known RBP	7.16	□□□□□ -1.26
NREP-222	ENST00000514515	ZNF18	P17022	549 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	PTPRE	P23469	700 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	MORC3	Q14149	939 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	SPATA1	Q5VX52	437 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	HELB	Q8NG08	1087 aa	Predicted RBP	7.16	□□□□□ -1.26
NREP-222	ENST00000514515	DCAF5	Q96JK2	942 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	TMEM87B	Q96K49	555 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	NAA15	Q9BXJ9	866 aa	Known RBP	7.16	□□□□□ -1.26
NREP-222	ENST00000514515	UBXN6	Q9BZV1	441 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	BLZF1	Q9H2G9	400 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	TAB2	Q9NYJ8	693 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	WWC3	Q9ULE0	1092 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	MYO6	Q9UM54	1294 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	L1RE1	Q9UN81	338 aa		7.16	□□□□□ -1.26
NREP-222	ENST00000514515	TRIM75P	A6NK02	468 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	EIF3CL	B5ME19	914 aa	Known RBP	7.15	□□□□□ -1.26
NREP-222	ENST00000514515	MAP2K7	O14733	419 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	FOXP2	O15409	715 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	ABL1	P00519	1130 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	FXR1	P51114	621 aa	Known RBP eCLIP	7.15	□□□□□ -1.26
NREP-222	ENST00000514515	CASP7	P55210	303 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	DIP2A	Q14689	1571 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	WTAP	Q15007	396 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	MFSD6	Q6ZSS7	791 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	KIAA1328	Q86T90	577 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	MICALL1	Q8N3F8	863 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	NKX2-3	Q8TAU0	364 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	DRC1	Q96MC2	740 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	EIF3C	Q99613	913 aa	Known RBP	7.15	□□□□□ -1.26
NREP-222	ENST00000514515	PSD3	Q9NYI0	1048 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	ZSWIM5	Q9P217	1185 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515		A0A1B0GTH6	734 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	MINDY4B	A8MYZ0	360 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	NBPF26	B4DH59	902 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	MFAP3L	O75121	409 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	RNF40	O75150	1001 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	XBP1	P17861	261 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	ERCC5	P28715	1186 aa	Predicted RBP	7.15	□□□□□ -1.26
NREP-222	ENST00000514515	ZNF174	Q15697	407 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	NBPF14	Q5TI25	921 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	NBPF10	Q6P3W6	841 aa	Known RBP	7.15	□□□□□ -1.26
NREP-222	ENST00000514515	TMTC1	Q8IUR5	882 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	NBPF15	Q8N660	670 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	OXER1	Q8TDS5	423 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	AFAP1L1	Q8TED9	768 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	UBAC1	Q9BSL1	405 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	RNF39	Q9H2S5	420 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	DEF6	Q9H4E7	631 aa		7.15	□□□□□ -1.26
NREP-222	ENST00000514515	MMP1	P03956	469 aa		7.15	□□□□□ -1.27
NREP-222	ENST00000514515	TOB1	P50616	345 aa	Predicted RBP	7.15	□□□□□ -1.27
NREP-222	ENST00000514515	MDM2	Q00987	491 aa	Predicted RBP	7.15	□□□□□ -1.27
NREP-222	ENST00000514515	UBXN1	Q04323	297 aa		7.15	□□□□□ -1.27
NREP-222	ENST00000514515	WHAMMP3	Q1A5X7	153 aa		7.15	□□□□□ -1.27
NREP-222	ENST00000514515	FBXL16	Q8N461	479 aa		7.15	□□□□□ -1.27
NREP-222	ENST00000514515	FAM71B	Q8TC56	605 aa		7.15	□□□□□ -1.27
NREP-222	ENST00000514515	RIN2	Q8WYP3	895 aa	Predicted RBP	7.15	□□□□□ -1.27
NREP-222	ENST00000514515	HDAC6	Q9UBN7	1215 aa		7.15	□□□□□ -1.27
NREP-222	ENST00000514515	FBXO2	Q9UK22	296 aa	Predicted RBP	7.15	□□□□□ -1.27
NREP-222	ENST00000514515	PIK3C2A	O00443	1686 aa		7.15	□□□□□ -1.27
NREP-222	ENST00000514515	SLIT1	O75093	1534 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	LRRC37A3	O60309	1634 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	CYP27B1	O15528	508 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	SRGAP2	O75044	1071 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	MBD4	O95243	580 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	MCAM	P43121	646 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	MATR3	P43243	847 aa	Known RBP eCLIP	7.14	□□□□□ -1.27
NREP-222	ENST00000514515	MAP9	Q49MG5	647 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	DNAJC21	Q5F1R6	531 aa	Known RBP	7.14	□□□□□ -1.27
NREP-222	ENST00000514515	FKBP15	Q5T1M5	1219 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	CYP26C1	Q6V0L0	522 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	TRIML1	Q8N9V2	468 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	EEF2KMT	Q96G04	330 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	ARMT1	Q9H993	441 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	EFCC1	Q9HA90	598 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	JADE2	Q9NQC1	790 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	SEC31B	Q9NQW1	1179 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	VPS54	Q9P1Q0	977 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	TRIM10	Q9UDY6	481 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	MKRN1	Q9UHC7	482 aa	Known RBP	7.14	□□□□□ -1.27
NREP-222	ENST00000514515		A0A0G2JS52	829 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	CCDC196	A0A1B0GTZ2	297 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	DCAF8L1	A6NGE4	600 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	LRRIQ3	A6PVS8	624 aa	Predicted RBP	7.14	□□□□□ -1.27
NREP-222	ENST00000514515	CIAO1	O76071	339 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	CD44	P16070	742 aa	Known RBP	7.14	□□□□□ -1.27
NREP-222	ENST00000514515	TUBB4B	P68371	445 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	TUBB2A	Q13885	445 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	CCDC122	Q5T0U0	273 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	CCDC70	Q6NSX1	233 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	SYNE4	Q8N205	404 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	MAGEB6	Q8N7X4	407 aa		7.14	□□□□□ -1.27
NREP-222	ENST00000514515	GPATCH11	Q8N954	259 aa		7.14	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms