RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 LTBP4Q8N2S1 1624 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 PTPRTO14522 1441 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 VPS8Q8N3P4 1428 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 GBP2P32456 591 aaPredicted RBP6.61□□□□□ -1.35
CLDND1-228ENST00000513873 MRPL58Q14197 206 aaKnown RBP6.61□□□□□ -1.35
CLDND1-228ENST00000513873 TSNAXIP1Q2TAA8 658 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 SGO2Q562F6 1265 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 AGMOQ6ZNB7 445 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 HS2ST1Q7LGA3 356 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 HDXQ7Z353 690 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 FBLIM1Q8WUP2 373 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 PCGF6Q9BYE7 350 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 CRIM1Q9NZV1 1036 aa6.61□□□□□ -1.35
CLDND1-228ENST00000513873 TMPRSS2O15393 492 aa6.6□□□□□ -1.35
CLDND1-228ENST00000513873 FBLN7Q53RD9 439 aa6.6□□□□□ -1.35
CLDND1-228ENST00000513873 CDC37L1Q7L3B6 337 aa6.6□□□□□ -1.35
CLDND1-228ENST00000513873 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
CLDND1-228ENST00000513873 JARID2Q92833 1246 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-228ENST00000513873 MRRFQ96E11 262 aaKnown RBP6.6□□□□□ -1.35
CLDND1-228ENST00000513873 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
CLDND1-228ENST00000513873 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
CLDND1-228ENST00000513873 GGT7Q9UJ14 662 aa6.6□□□□□ -1.35
CLDND1-228ENST00000513873 PPP1R9AQ9ULJ8 1098 aa6.6□□□□□ -1.35
CLDND1-228ENST00000513873 MED1Q15648 1581 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-228ENST00000513873 ADAMTS4O75173 837 aa6.59□□□□□ -1.35
CLDND1-228ENST00000513873 BPNT1O95861 308 aa6.59□□□□□ -1.35
CLDND1-228ENST00000513873 ERVK-24P63145 666 aa6.59□□□□□ -1.35
CLDND1-228ENST00000513873 ZC3H12AQ5D1E8 599 aaKnown RBP6.59□□□□□ -1.35
CLDND1-228ENST00000513873 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
CLDND1-228ENST00000513873 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
CLDND1-228ENST00000513873 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
CLDND1-228ENST00000513873 FAM105AQ9NUU6 356 aa6.59□□□□□ -1.35
CLDND1-228ENST00000513873 DAGLAQ9Y4D2 1042 aa6.59□□□□□ -1.35
CLDND1-228ENST00000513873 POGZQ7Z3K3 1410 aa6.59□□□□□ -1.36
CLDND1-228ENST00000513873 TTC37Q6PGP7 1564 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 HMX2A2RU54 273 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 DCDC2CA8MYV0 355 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 MINDY4BA8MYZ0 360 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 RAPGEF3O95398 923 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 NFICP08651 508 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 ZNF76P36508 570 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 NFIAQ12857 509 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 MPRIPQ6WCQ1 1025 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 ZDHHC13Q8IUH4 622 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 SMYD4Q8IYR2 804 aaPredicted RBP6.58□□□□□ -1.36
CLDND1-228ENST00000513873 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 BACH2Q9BYV9 841 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 ATG3Q9NT62 314 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 ANGEL1Q9UNK9 670 aaKnown RBP6.58□□□□□ -1.36
CLDND1-228ENST00000513873 CSADQ9Y600 493 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 SNCAIPQ9Y6H5 919 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 FER1L4A9Z1Z3 1794 aa6.58□□□□□ -1.36
CLDND1-228ENST00000513873 IQGAP2Q13576 1575 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 DISP1Q96F81 1524 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 HCLS1P14317 486 aaPredicted RBP6.57□□□□□ -1.36
CLDND1-228ENST00000513873 VAMP1P23763 118 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 SEPT6Q14141 434 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 TTLL4Q14679 1199 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 SNAP47Q5SQN1 464 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 C12orf40Q86WS4 652 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.57□□□□□ -1.36
CLDND1-228ENST00000513873 KCT2Q8NC54 265 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 RNF214Q8ND24 703 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 PHC3Q8NDX5 983 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 DBNDD2Q9BQY9 259 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 GSX1Q9H4S2 264 aaPredicted RBP6.57□□□□□ -1.36
CLDND1-228ENST00000513873 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 DISC1Q9NRI5 854 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 TLR6Q9Y2C9 796 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 FMN1Q68DA7 1419 aa6.57□□□□□ -1.36
CLDND1-228ENST00000513873 EFCAB5A4FU69 1503 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 FANCAO15360 1455 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 NEO1Q92859 1461 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 PRAMEF27A3QJZ7 478 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 F6X3S4 739 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
CLDND1-228ENST00000513873 FANCGO15287 622 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 TFE3P19532 575 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-228ENST00000513873 LMNB2Q03252 620 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 CAMK2GQ13555 558 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-228ENST00000513873 PPM1JQ5JR12 505 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 WIPI1Q5MNZ9 446 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-228ENST00000513873 RASIP1Q5U651 963 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 CCDC84Q86UT8 332 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-228ENST00000513873 FBXL6Q8N531 539 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 ZNF507Q8TCN5 953 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 EZH1Q92800 747 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-228ENST00000513873 RNF34Q969K3 372 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 TBC1D32Q96NH3 1257 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 SEMA6CQ9H3T2 930 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 ACSS3Q9H6R3 686 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 METTL5Q9NRN9 209 aaKnown RBP6.56□□□□□ -1.36
CLDND1-228ENST00000513873 KBTBD4Q9NVX7 518 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 CACNA2D2Q9NY47 1150 aa6.56□□□□□ -1.36
CLDND1-228ENST00000513873 PF4P02776 101 aa6.55□□□□□ -1.36
CLDND1-228ENST00000513873 ZEB1P37275 1124 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms