RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 MISP3Q96FF7 219 aa10.11□□□□□ -0.79
TRAPPC11-210ENST00000513600 TMEM87BQ96K49 555 aa10.11□□□□□ -0.79
TRAPPC11-210ENST00000513600 MIPEPQ99797 713 aa10.11□□□□□ -0.79
TRAPPC11-210ENST00000513600 GREM1O60565 184 aa10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 PLCG1P19174 1290 aa10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 IFI16Q16666 785 aaKnown RBP10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 STK11IPQ8N1F8 1099 aa10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 PLD6Q8N2A8 252 aaKnown RBP10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 ZNF296Q8WUU4 475 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 PRDM5Q9NQX1 630 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 MAPK8IP1Q9UQF2 711 aa10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 CORINQ9Y5Q5 1042 aa10.1□□□□□ -0.79
TRAPPC11-210ENST00000513600 PRR36Q9H6K5 1346 aa10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 CEACAM5P06731 702 aa10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 CWF19L2Q2TBE0 894 aaKnown RBP10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 TMEM201Q5SNT2 666 aa10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 ZNF746Q6NUN9 644 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 LETMD1Q6P1Q0 360 aa10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 REC114Q7Z4M0 266 aa10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 ACSF2Q96CM8 615 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 FBXL18Q96ME1 805 aa10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 LRRC3Q9BY71 257 aa10.09□□□□□ -0.79
TRAPPC11-210ENST00000513600 FANCCQ00597 558 aa10.08□□□□□ -0.8
TRAPPC11-210ENST00000513600 FBXO27Q8NI29 283 aa10.08□□□□□ -0.8
TRAPPC11-210ENST00000513600 ADAMTS1Q9UHI8 967 aa10.08□□□□□ -0.8
TRAPPC11-210ENST00000513600 TPX2Q9ULW0 747 aaKnown RBP10.08□□□□□ -0.8
TRAPPC11-210ENST00000513600 U3KQE9 123 aa10.08□□□□□ -0.8
TRAPPC11-210ENST00000513600 TMEM265A0A087WTH1 108 aa10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 GNAT3A8MTJ3 354 aa10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 RECKO95980 971 aa10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 RNF34Q969K3 372 aa10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 MRRFQ96E11 262 aaKnown RBP10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 VAV3Q9UKW4 847 aa10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 SLC5A6Q9Y289 635 aa10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 POLR3KQ9Y2Y1 108 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC11-210ENST00000513600 SCAMP3O14828 347 aaKnown RBP10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 TLR3O15455 904 aaKnown RBP10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 ITIH2P19823 946 aa10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 SFRP5Q5T4F7 317 aa10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 FAM13CQ8NE31 585 aa10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 FLCNQ8NFG4 579 aa10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 BCL7CQ8WUZ0 217 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 COX4I2Q96KJ9 171 aa10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 DPH2Q9BQC3 489 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 TNKS2Q9H2K2 1166 aa10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 PLAGL2Q9UPG8 496 aa10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 SNX11Q9Y5W9 270 aa10.06□□□□□ -0.8
TRAPPC11-210ENST00000513600 GRIN3BO60391 1043 aa10.05□□□□□ -0.8
TRAPPC11-210ENST00000513600 HTR3BO95264 441 aa10.05□□□□□ -0.8
TRAPPC11-210ENST00000513600 CYP7A1P22680 504 aa10.05□□□□□ -0.8
TRAPPC11-210ENST00000513600 PRKCQQ04759 706 aa10.05□□□□□ -0.8
TRAPPC11-210ENST00000513600 C22orf34Q6ZV56 151 aa10.05□□□□□ -0.8
TRAPPC11-210ENST00000513600 RIN3Q8TB24 985 aa10.05□□□□□ -0.8
TRAPPC11-210ENST00000513600 REV1Q9UBZ9 1251 aa10.05□□□□□ -0.8
TRAPPC11-210ENST00000513600 OAS3Q9Y6K5 1087 aaKnown RBP10.05□□□□□ -0.8
TRAPPC11-210ENST00000513600 MLECQ14165 292 aa10.04□□□□□ -0.8
TRAPPC11-210ENST00000513600 NFXL1Q6ZNB6 911 aa10.04□□□□□ -0.8
TRAPPC11-210ENST00000513600 USP48Q86UV5 1035 aa10.04□□□□□ -0.8
TRAPPC11-210ENST00000513600 TP53INP2Q8IXH6 220 aa10.04□□□□□ -0.8
TRAPPC11-210ENST00000513600 HRASLS5Q96KN8 279 aa10.04□□□□□ -0.8
TRAPPC11-210ENST00000513600 NT5C1AQ9BXI3 368 aa10.04□□□□□ -0.8
TRAPPC11-210ENST00000513600 KIAA0825Q8IV33 1275 aa10.03□□□□□ -0.8
TRAPPC11-210ENST00000513600 AGBL5Q8NDL9 886 aa10.03□□□□□ -0.8
TRAPPC11-210ENST00000513600 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
TRAPPC11-210ENST00000513600 BRMS1Q9HCU9 246 aa10.03□□□□□ -0.8
TRAPPC11-210ENST00000513600 UPK3BL1B0FP48 263 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 UPK3BL2E5RIL1 263 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 ZNF865P0CJ78 1059 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 ETV3P41162 512 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 AOC3Q16853 763 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 CDH24Q86UP0 819 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 SPACA3Q8IXA5 215 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 SLFN12Q8IYM2 578 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 CYB5D2Q8WUJ1 264 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 PAK6Q9NQU5 681 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 CEP131Q9UPN4 1083 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 PCDHB14Q9Y5E9 798 aa10.02□□□□□ -0.81
TRAPPC11-210ENST00000513600 KIR3DL1P43629 444 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 CRKP46108 304 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 CLCN7P51798 805 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 APOBRQ0VD83 1088 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 BNIP3Q12983 259 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 NKPD1Q17RQ9 610 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 MFSD4AQ8N468 514 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 UBP1Q9NZI7 540 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 KLHL3Q9UH77 587 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 CNTNAP4Q9C0A0 1308 aa10.01□□□□□ -0.81
TRAPPC11-210ENST00000513600 UNCXA6NJT0 531 aa10□□□□□ -0.81
TRAPPC11-210ENST00000513600 FAM155AB1AL88 458 aaPredicted RBP10□□□□□ -0.81
TRAPPC11-210ENST00000513600 ATE1O95260 518 aa10□□□□□ -0.81
TRAPPC11-210ENST00000513600 SEZ6Q53EL9 994 aa10□□□□□ -0.81
TRAPPC11-210ENST00000513600 ZNF394Q53GI3 561 aa10□□□□□ -0.81
TRAPPC11-210ENST00000513600 SPRED2Q7Z698 418 aa10□□□□□ -0.81
TRAPPC11-210ENST00000513600 DNAJB8Q8NHS0 232 aa10□□□□□ -0.81
TRAPPC11-210ENST00000513600 ASB11Q8WXH4 323 aa10□□□□□ -0.81
TRAPPC11-210ENST00000513600 NKD1Q969G9 470 aa10□□□□□ -0.81
TRAPPC11-210ENST00000513600 KIAA1522Q9P206 1035 aaPredicted RBP10□□□□□ -0.81
TRAPPC11-210ENST00000513600 CHURC1-FNTBB4DL54 471 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms