RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
CLDND1-227ENST00000513452 PRDM5Q9NQX1 630 aaPredicted RBP13.04□□□□□ -0.32
CLDND1-227ENST00000513452 RBPJLQ9UBG7 517 aa13.04□□□□□ -0.32
CLDND1-227ENST00000513452 ATP11BQ9Y2G3 1177 aa13.04□□□□□ -0.32
CLDND1-227ENST00000513452 GPR75-ASB3A0A0A6YYF3 556 aa13.03□□□□□ -0.32
CLDND1-227ENST00000513452 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
CLDND1-227ENST00000513452 CIAO1O76071 339 aa13.03□□□□□ -0.32
CLDND1-227ENST00000513452 CNGA1P29973 690 aa13.03□□□□□ -0.32
CLDND1-227ENST00000513452 SMAD3P84022 425 aaKnown RBP13.03□□□□□ -0.32
CLDND1-227ENST00000513452 Q3C1V9 767 aa13.03□□□□□ -0.32
CLDND1-227ENST00000513452 MFSD14CQ5VZR4 134 aa13.03□□□□□ -0.32
CLDND1-227ENST00000513452 ZNF384Q8TF68 577 aa13.03□□□□□ -0.32
CLDND1-227ENST00000513452 WDR18Q9BV38 432 aa13.03□□□□□ -0.32
CLDND1-227ENST00000513452 DDX20Q9UHI6 824 aaKnown RBP13.03□□□□□ -0.32
CLDND1-227ENST00000513452 RAPGEFL1Q9UHV5 662 aa13.03□□□□□ -0.32
CLDND1-227ENST00000513452 TNFRSF10AO00220 468 aa13.02□□□□□ -0.33
CLDND1-227ENST00000513452 DNM1LO00429 736 aa13.02□□□□□ -0.33
CLDND1-227ENST00000513452 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
CLDND1-227ENST00000513452 ERICH6Q7L0X2 663 aa13.02□□□□□ -0.33
CLDND1-227ENST00000513452 FLRT1Q9NZU1 646 aa13.02□□□□□ -0.33
CLDND1-227ENST00000513452 HERC5Q9UII4 1024 aaKnown RBP13.02□□□□□ -0.33
CLDND1-227ENST00000513452 NDUFB9Q9Y6M9 179 aa13.02□□□□□ -0.33
CLDND1-227ENST00000513452 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.33
CLDND1-227ENST00000513452 ASNSP08243 561 aa13.01□□□□□ -0.33
CLDND1-227ENST00000513452 SHROOM1Q2M3G4 852 aaPredicted RBP13.01□□□□□ -0.33
CLDND1-227ENST00000513452 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
CLDND1-227ENST00000513452 WDR78Q5VTH9 848 aa13.01□□□□□ -0.33
CLDND1-227ENST00000513452 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
CLDND1-227ENST00000513452 TEX11Q8IYF3 940 aa13.01□□□□□ -0.33
CLDND1-227ENST00000513452 GTF3C2Q8WUA4 911 aaPredicted RBP13.01□□□□□ -0.33
CLDND1-227ENST00000513452 LPAR1Q92633 364 aa13.01□□□□□ -0.33
CLDND1-227ENST00000513452 BADQ92934 168 aa13.01□□□□□ -0.33
CLDND1-227ENST00000513452 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
CLDND1-227ENST00000513452 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
CLDND1-227ENST00000513452 SIPA1L1O43166 1804 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 PTPRCP08575 1304 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 C19orf81C9J6K1 198 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 USP17L10C9JJH3 530 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 ZBTB22O15209 634 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 MSCO60682 206 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 IL15P40933 162 aaPredicted RBP13□□□□□ -0.33
CLDND1-227ENST00000513452 JAG1P78504 1218 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
CLDND1-227ENST00000513452 GJC2Q5T442 439 aaPredicted RBP13□□□□□ -0.33
CLDND1-227ENST00000513452 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
CLDND1-227ENST00000513452 USP38Q8NB14 1042 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
CLDND1-227ENST00000513452 MUC3AQ02505 3323 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 DNAH12Q6ZR08 3092 aa13□□□□□ -0.33
CLDND1-227ENST00000513452 GLRX3O76003 335 aaKnown RBP12.99□□□□□ -0.33
CLDND1-227ENST00000513452 GDF11O95390 407 aa12.99□□□□□ -0.33
CLDND1-227ENST00000513452 CYP2C19P33261 490 aa12.99□□□□□ -0.33
CLDND1-227ENST00000513452 GSTO1P78417 241 aa12.99□□□□□ -0.33
CLDND1-227ENST00000513452 ATP2B2Q01814 1243 aa12.99□□□□□ -0.33
CLDND1-227ENST00000513452 TRIM60Q495X7 471 aa12.99□□□□□ -0.33
CLDND1-227ENST00000513452 DNAJC18Q9H819 358 aa12.99□□□□□ -0.33
CLDND1-227ENST00000513452 PDLIM7Q9NR12 457 aa12.99□□□□□ -0.33
CLDND1-227ENST00000513452 PI4KBQ9UBF8 816 aa12.99□□□□□ -0.33
CLDND1-227ENST00000513452 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 KBTBD13C9JR72 458 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 MAP4K4O95819 1239 aaPredicted RBP12.98□□□□□ -0.33
CLDND1-227ENST00000513452 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
CLDND1-227ENST00000513452 LDHCP07864 332 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 UBTFL1P0CB47 393 aaPredicted RBP12.98□□□□□ -0.33
CLDND1-227ENST00000513452 TIMM10P62072 90 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 CCNA1P78396 465 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 PI16Q6UXB8 463 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 SLC39A5Q6ZMH5 540 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 TBC1D9Q6ZT07 1266 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 TRPV1Q8NER1 839 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 SH3RF3Q8TEJ3 882 aaPredicted RBP12.98□□□□□ -0.33
CLDND1-227ENST00000513452 NSUN4Q96CB9 384 aaKnown RBP12.98□□□□□ -0.33
CLDND1-227ENST00000513452 RNPC3Q96LT9 517 aaKnown RBP12.98□□□□□ -0.33
CLDND1-227ENST00000513452 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 ZBTB21Q9ULJ3 1066 aa12.98□□□□□ -0.33
CLDND1-227ENST00000513452 TMEM265A0A087WTH1 108 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 CNMDO75829 334 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 CYBAP13498 195 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 PTPREP23469 700 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 PLA2G5P39877 138 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
CLDND1-227ENST00000513452 ZYXQ15942 572 aaKnown RBP12.97□□□□□ -0.33
CLDND1-227ENST00000513452 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 SH3RF1Q7Z6J0 888 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 CRACR2BQ8N4Y2 399 aaPredicted RBP12.97□□□□□ -0.33
CLDND1-227ENST00000513452 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 NPLOC4Q8TAT6 608 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 MRS2Q9HD23 443 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 RAI14Q9P0K7 980 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 HMG20BQ9P0W2 317 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 RLFQ13129 1914 aa12.97□□□□□ -0.33
CLDND1-227ENST00000513452 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
CLDND1-227ENST00000513452 HOXC6P09630 235 aa12.96□□□□□ -0.33
CLDND1-227ENST00000513452 GRIN2CQ14957 1233 aa12.96□□□□□ -0.33
CLDND1-227ENST00000513452 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms