RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 CLEC10AQ8IUN9 316 aa3.66□□□□□ -1.82
RNF4-219ENST00000513450 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.66□□□□□ -1.82
RNF4-219ENST00000513450 SLFN12Q8IYM2 578 aa3.66□□□□□ -1.82
RNF4-219ENST00000513450 UBXN4Q92575 508 aa3.66□□□□□ -1.82
RNF4-219ENST00000513450 ACSF2Q96CM8 615 aaPredicted RBP3.66□□□□□ -1.82
RNF4-219ENST00000513450 SHDQ96IW2 340 aa3.66□□□□□ -1.82
RNF4-219ENST00000513450 SEMA6CQ9H3T2 930 aa3.66□□□□□ -1.82
RNF4-219ENST00000513450 GMIPQ9P107 970 aa3.66□□□□□ -1.82
RNF4-219ENST00000513450 TJP2Q9UDY2 1190 aa3.66□□□□□ -1.82
RNF4-219ENST00000513450 PPT2Q9UMR5 302 aa3.66□□□□□ -1.82
RNF4-219ENST00000513450 SLC22A31A6NKX4 558 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 LRIG2O94898 1065 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 NFICP08651 508 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 RXRBP28702 533 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 RBL2Q08999 1139 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 SLBPQ14493 270 aaKnown RBP eCLIP3.65□□□□□ -1.83
RNF4-219ENST00000513450 TNNI3KQ59H18 835 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 CDCP2Q5VXM1 449 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 FBXW10Q5XX13 1052 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 INTS3Q68E01 1043 aaKnown RBP3.65□□□□□ -1.83
RNF4-219ENST00000513450 PAOXQ6QHF9 649 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 SEZ6L2Q6UXD5 910 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 BEND4Q6ZU67 534 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 TAB3Q8N5C8 712 aaPredicted RBP3.65□□□□□ -1.83
RNF4-219ENST00000513450 MFSD2AQ8NA29 543 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 FAM13CQ8NE31 585 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 GIMAP7Q8NHV1 300 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 FBLIM1Q8WUP2 373 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 TMEM40Q8WWA1 233 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 TP53INP1Q96A56 240 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 TMEM87BQ96K49 555 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 TM9SF2Q99805 663 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 FAM83CQ9BQN1 747 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 HIRIP3Q9BW71 556 aaPredicted RBP3.65□□□□□ -1.83
RNF4-219ENST00000513450 KCNF1Q9H3M0 494 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 SEMA6BQ9H3T3 888 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 CNNM2Q9H8M5 875 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 FBRSQ9HAH7 460 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 DAGLAQ9Y4D2 1042 aa3.65□□□□□ -1.83
RNF4-219ENST00000513450 STK10O94804 968 aaKnown RBP3.64□□□□□ -1.83
RNF4-219ENST00000513450 CST3P01034 146 aaPredicted RBP3.64□□□□□ -1.83
RNF4-219ENST00000513450 NME1P15531 152 aaKnown RBP3.64□□□□□ -1.83
RNF4-219ENST00000513450 GTF2F1P35269 517 aaKnown RBP eCLIP3.64□□□□□ -1.83
RNF4-219ENST00000513450 CCNFP41002 786 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 NFKBIBQ15653 356 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 NKG7Q16617 165 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 SOGA3Q5TF21 947 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 OVOS1Q6IE37 1185 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 CCDC81Q6ZN84 652 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 PRR23CQ6ZRP0 262 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 NLRC3Q7RTR2 1065 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 LSRQ86X29 649 aaPredicted RBP3.64□□□□□ -1.83
RNF4-219ENST00000513450 C19orf47Q8N9M1 422 aaKnown RBP3.64□□□□□ -1.83
RNF4-219ENST00000513450 ANAPC16Q96DE5 110 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 ATG4CQ96DT6 458 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 FOXQ1Q9C009 403 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 ZNF408Q9H9D4 720 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 USP35Q9P2H5 1018 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 STOML1Q9UBI4 398 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 PRKAG3Q9UGI9 489 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 RAXQ9Y2V3 346 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 SLC12A7Q9Y666 1083 aa3.64□□□□□ -1.83
RNF4-219ENST00000513450 UPK3BL1B0FP48 263 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 CHURC1-FNTBB4DL54 471 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 UPK3BL2E5RIL1 263 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 TNFRSF10CO14798 259 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 DNAJA2O60884 412 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 H2AFB1P0C5Y9 115 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 H2AFB2P0C5Z0 115 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 RAG1P15918 1043 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 GUCY2CP25092 1073 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 ETFBP38117 255 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 CASP7P55210 303 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 ARSHQ5FYA8 562 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 NBPF6Q5VWK0 638 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 PRAMEF13Q5VWM6 474 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 ARMCX6Q7L4S7 300 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 UBE3DQ7Z6J8 389 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 SLC51AQ86UW1 340 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 CKAP2LQ8IYA6 745 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 CYB5D2Q8WUJ1 264 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 DHX38Q92620 1227 aaKnown RBP3.63□□□□□ -1.83
RNF4-219ENST00000513450 CCDC74BQ96LY2 380 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 NBPF4Q96M43 638 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 ANTXR1Q9H6X2 564 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 C7orf69Q9H7B7 122 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 TPSG1Q9NRR2 321 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 C1GALT1Q9NS00 363 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 PPP1R1BQ9UD71 204 aaPredicted RBP3.63□□□□□ -1.83
RNF4-219ENST00000513450 KLHL3Q9UH77 587 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 MRVI1Q9Y6F6 885 aa3.63□□□□□ -1.83
RNF4-219ENST00000513450 RGS13O14921 159 aa3.62□□□□□ -1.83
RNF4-219ENST00000513450 GSC2O15499 205 aa3.62□□□□□ -1.83
RNF4-219ENST00000513450 GBP1P32455 592 aa3.62□□□□□ -1.83
RNF4-219ENST00000513450 CYP27A1Q02318 531 aa3.62□□□□□ -1.83
RNF4-219ENST00000513450 DOC2BQ14184 412 aa3.62□□□□□ -1.83
RNF4-219ENST00000513450 ZNF746Q6NUN9 644 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms