RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 TPTE2Q6XPS3 522 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 PRICKLE2Q7Z3G6 844 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 TRIM46Q7Z4K8 759 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 PHACTR1Q9C0D0 580 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 R3HDMLQ9H3Y0 253 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 GBA2Q9HCG7 927 aaPredicted RBP6.46□□□□□ -1.38
HTT-211ENST00000513326 ZDHHC3Q9NYG2 299 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 AKAP11Q9UKA4 1901 aa6.46□□□□□ -1.38
HTT-211ENST00000513326 CEMIPQ8WUJ3 1361 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 SZT2Q5T011 3432 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 TBC1D8O95759 1140 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 BRD2P25440 801 aaKnown RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 HOXA10P31260 410 aaPredicted RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 ZNF157P51786 506 aaPredicted RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 MARSP56192 900 aaKnown RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 TEFQ10587 303 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 C11orf91Q3C1V1 193 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 TBC1D10BQ4KMP7 808 aaPredicted RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 SUSD4Q5VX71 490 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 TTLL7Q6ZT98 887 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 MOB2Q70IA6 237 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 CDC37L1Q7L3B6 337 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 KRT26Q7Z3Y9 468 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 RASAL3Q86YV0 1011 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 NGEFQ8N5V2 710 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 ZNF296Q8WUU4 475 aaPredicted RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 RPGRQ92834 1020 aaKnown RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 PHACTR3Q96KR7 559 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 ZFP42Q96MM3 310 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 TEX13AQ9BXU3 409 aaPredicted RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 CNOT7Q9UIV1 285 aaKnown RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 LRFN2Q9ULH4 789 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 SCAF8Q9UPN6 1271 aaKnown RBP6.45□□□□□ -1.38
HTT-211ENST00000513326 ZNF652Q9Y2D9 606 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 TAF1P21675 1872 aa6.45□□□□□ -1.38
HTT-211ENST00000513326 NUP98P52948 1817 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 BTBD11A6QL63 1104 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 GNAT3A8MTJ3 354 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 TNFRSF10BO14763 440 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 ERCC3P19447 782 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 MPSTP25325 297 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 TXLNAP40222 546 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 PHKA2P46019 1235 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 ARHGAP4P98171 946 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 ALKBH2Q6NS38 261 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 ZNF428Q96B54 188 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 BCL2L13Q9BXK5 485 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 KCNQ5Q9NR82 932 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 GPC6Q9Y625 555 aaPredicted RBP6.44□□□□□ -1.38
HTT-211ENST00000513326 ABCC4O15439 1325 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 KIF7Q2M1P5 1343 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 PAPPA2Q9BXP8 1791 aa6.44□□□□□ -1.38
HTT-211ENST00000513326 KIAA0100Q14667 2235 aaKnown RBP6.44□□□□□ -1.38
HTT-211ENST00000513326 CEP290O15078 2479 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 PSMD14O00487 310 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 NTSR2O95665 410 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 DCTN1Q14203 1278 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 HIF1AQ16665 826 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 MCM10Q7L590 875 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 NPM2Q86SE8 214 aaKnown RBP6.43□□□□□ -1.38
HTT-211ENST00000513326 RHPN1Q8TCX5 695 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 GCC1Q96CN9 775 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 CRAMP1Q96RY5 1269 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 RTFDC1Q9BY42 306 aaPredicted RBP6.43□□□□□ -1.38
HTT-211ENST00000513326 TIMMDC1Q9NPL8 285 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 ATP13A2Q9NQ11 1180 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 AAASQ9NRG9 546 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 MIS18AQ9NYP9 233 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 ATP6V0A2Q9Y487 856 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 BRCA2P51587 3418 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 LAMB2P55268 1798 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 RTL9Q8NET4 1388 aa6.43□□□□□ -1.38
HTT-211ENST00000513326 SCN9AQ15858 1988 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 LAMB4A4D0S4 1761 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 A0A1B0GTH6 734 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 FIGNL2A6NMB9 653 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 EIF1AXP47813 144 aaKnown RBP6.42□□□□□ -1.38
HTT-211ENST00000513326 CAP1Q01518 475 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 KIAA2012Q0VF49 1180 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.42□□□□□ -1.38
HTT-211ENST00000513326 NOM1Q5C9Z4 860 aaKnown RBP6.42□□□□□ -1.38
HTT-211ENST00000513326 DNAJC14Q6Y2X3 702 aaPredicted RBP6.42□□□□□ -1.38
HTT-211ENST00000513326 CDCA5Q96FF9 252 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 IFT43Q96FT9 208 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 RBM17Q96I25 401 aaKnown RBP6.42□□□□□ -1.38
HTT-211ENST00000513326 GGA3Q9NZ52 723 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 KLK14Q9P0G3 267 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 DCTN4Q9UJW0 460 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 HDAC9Q9UKV0 1011 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 CDHR2Q9BYE9 1310 aa6.42□□□□□ -1.38
HTT-211ENST00000513326 CUL9Q8IWT3 2517 aa6.41□□□□□ -1.38
HTT-211ENST00000513326 GPR25O00155 361 aa6.41□□□□□ -1.38
HTT-211ENST00000513326 DLL1O00548 723 aa6.41□□□□□ -1.38
HTT-211ENST00000513326 U2SURPO15042 1029 aaKnown RBP6.41□□□□□ -1.38
HTT-211ENST00000513326 DIAPH1O60610 1272 aaKnown RBP6.41□□□□□ -1.38
HTT-211ENST00000513326 SNRPA1P09661 255 aaKnown RBP6.41□□□□□ -1.38
HTT-211ENST00000513326 RHOQP17081 205 aa6.41□□□□□ -1.38
HTT-211ENST00000513326 MAPK1P28482 360 aa6.41□□□□□ -1.38
HTT-211ENST00000513326 AAMPQ13685 434 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms