RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 OPTNQ96CV9 577 aa25■■□□□ 1.59
NEIL3-202ENST00000513321 WNK4Q96J92 1243 aa25■■□□□ 1.59
NEIL3-202ENST00000513321 LSG1Q9H089 658 aaKnown RBP25■■□□□ 1.59
NEIL3-202ENST00000513321 ANO2Q9NQ90 1003 aa25■■□□□ 1.59
NEIL3-202ENST00000513321 WDR33Q9C0J8 1336 aaKnown RBP25■■□□□ 1.59
NEIL3-202ENST00000513321 ZNF213O14771 459 aa24.99■■□□□ 1.59
NEIL3-202ENST00000513321 PTPRAP18433 802 aa24.99■■□□□ 1.59
NEIL3-202ENST00000513321 MKRN3Q13064 507 aaKnown RBP24.99■■□□□ 1.59
NEIL3-202ENST00000513321 ABCB5Q2M3G0 1257 aa24.99■■□□□ 1.59
NEIL3-202ENST00000513321 OTUD5Q96G74 571 aa24.99■■□□□ 1.59
NEIL3-202ENST00000513321 ZNF287Q9HBT7 754 aa24.99■■□□□ 1.59
NEIL3-202ENST00000513321 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.99■■□□□ 1.59
NEIL3-202ENST00000513321 U3KPZ7 1027 aaPredicted RBP24.99■■□□□ 1.59
NEIL3-202ENST00000513321 OTOFQ9HC10 1997 aa24.99■■□□□ 1.59
NEIL3-202ENST00000513321 PRDM1O75626 825 aa24.98■■□□□ 1.59
NEIL3-202ENST00000513321 GH2P01242 217 aa24.98■■□□□ 1.59
NEIL3-202ENST00000513321 ASNSP08243 561 aa24.98■■□□□ 1.59
NEIL3-202ENST00000513321 GJA5P36382 358 aa24.98■■□□□ 1.59
NEIL3-202ENST00000513321 PDE4BQ07343 736 aa24.98■■□□□ 1.59
NEIL3-202ENST00000513321 INCENPQ9NQS7 918 aa24.98■■□□□ 1.59
NEIL3-202ENST00000513321 GINM1Q9NU53 330 aa24.98■■□□□ 1.59
NEIL3-202ENST00000513321 ZHX2Q9Y6X8 837 aa24.98■■□□□ 1.59
NEIL3-202ENST00000513321 PPATQ06203 517 aa24.97■■□□□ 1.59
NEIL3-202ENST00000513321 IMMTQ16891 758 aaKnown RBP24.97■■□□□ 1.59
NEIL3-202ENST00000513321 CCDC84Q86UT8 332 aaPredicted RBP24.97■■□□□ 1.59
NEIL3-202ENST00000513321 CCDC17Q96LX7 622 aa24.97■■□□□ 1.59
NEIL3-202ENST00000513321 CABP5Q9NP86 173 aa24.97■■□□□ 1.59
NEIL3-202ENST00000513321 ZBTB21Q9ULJ3 1066 aa24.97■■□□□ 1.59
NEIL3-202ENST00000513321 MPHOSPH10O00566 681 aaKnown RBP24.96■■□□□ 1.59
NEIL3-202ENST00000513321 AOC2O75106 756 aa24.96■■□□□ 1.59
NEIL3-202ENST00000513321 RASA1P20936 1047 aa24.96■■□□□ 1.59
NEIL3-202ENST00000513321 NBPF3Q9H094 633 aa24.96■■□□□ 1.59
NEIL3-202ENST00000513321 TACC3Q9Y6A5 838 aa24.96■■□□□ 1.59
NEIL3-202ENST00000513321 ZBTB48P10074 688 aaPredicted RBP24.96■■□□□ 1.59
NEIL3-202ENST00000513321 AKR1B1P15121 316 aa24.96■■□□□ 1.59
NEIL3-202ENST00000513321 NOGQ13253 232 aa24.96■■□□□ 1.59
NEIL3-202ENST00000513321 ZNF444Q8N0Y2 327 aaPredicted RBP24.96■■□□□ 1.59
NEIL3-202ENST00000513321 RBM8AQ9Y5S9 174 aaKnown RBP24.96■■□□□ 1.59
NEIL3-202ENST00000513321 USP17L5A8MUK1 530 aa24.95■■□□□ 1.58
NEIL3-202ENST00000513321 PPIL2Q13356 520 aa24.95■■□□□ 1.58
NEIL3-202ENST00000513321 ZIC5Q96T25 663 aa24.95■■□□□ 1.58
NEIL3-202ENST00000513321 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.95■■□□□ 1.58
NEIL3-202ENST00000513321 IRF6O14896 467 aa24.94■■□□□ 1.58
NEIL3-202ENST00000513321 FGRP09769 529 aa24.94■■□□□ 1.58
NEIL3-202ENST00000513321 RAB3GAP1Q15042 981 aa24.94■■□□□ 1.58
NEIL3-202ENST00000513321 AKNAD1Q5T1N1 836 aa24.94■■□□□ 1.58
NEIL3-202ENST00000513321 TBC1D10CQ8IV04 446 aa24.94■■□□□ 1.58
NEIL3-202ENST00000513321 LAMB1P07942 1786 aa24.94■■□□□ 1.58
NEIL3-202ENST00000513321 KIF23Q02241 960 aaPredicted RBP24.93■■□□□ 1.58
NEIL3-202ENST00000513321 SEPT2Q15019 361 aa24.93■■□□□ 1.58
NEIL3-202ENST00000513321 MFSD6Q6ZSS7 791 aa24.93■■□□□ 1.58
NEIL3-202ENST00000513321 TMEM179Q6ZVK1 233 aa24.93■■□□□ 1.58
NEIL3-202ENST00000513321 AFG3L2Q9Y4W6 797 aa24.93■■□□□ 1.58
NEIL3-202ENST00000513321 GUCY1A2P33402 732 aa24.92■■□□□ 1.58
NEIL3-202ENST00000513321 MAP2K2P36507 400 aa24.92■■□□□ 1.58
NEIL3-202ENST00000513321 STAG1Q8WVM7 1258 aa24.92■■□□□ 1.58
NEIL3-202ENST00000513321 RNF41Q9H4P4 317 aaPredicted RBP24.92■■□□□ 1.58
NEIL3-202ENST00000513321 TOMM22Q9NS69 142 aa24.92■■□□□ 1.58
NEIL3-202ENST00000513321 ORC4O43929 436 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 REC8O95072 547 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 CYP21A2P08686 494 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 DOCK1Q14185 1865 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 PCP11498 1178 aaKnown RBP24.91■■□□□ 1.58
NEIL3-202ENST00000513321 TFAP4Q01664 338 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 SPP2Q13103 211 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 FAM47AQ5JRC9 791 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 RRP12Q5JTH9 1297 aaKnown RBP24.91■■□□□ 1.58
NEIL3-202ENST00000513321 ZNF280CQ8ND82 737 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 MS4A4AQ96JQ5 239 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 WDR18Q9BV38 432 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.91■■□□□ 1.58
NEIL3-202ENST00000513321 TBC1D2Q9BYX2 928 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 AS3MTQ9HBK9 375 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 KCNH4Q9UQ05 1017 aa24.91■■□□□ 1.58
NEIL3-202ENST00000513321 TRIM75PA6NK02 468 aa24.9■■□□□ 1.58
NEIL3-202ENST00000513321 CXCL11O14625 94 aa24.9■■□□□ 1.58
NEIL3-202ENST00000513321 RANBP6O60518 1105 aaKnown RBP24.9■■□□□ 1.58
NEIL3-202ENST00000513321 GTF2A2P52657 109 aa24.9■■□□□ 1.58
NEIL3-202ENST00000513321 SNAPC2Q13487 334 aa24.9■■□□□ 1.58
NEIL3-202ENST00000513321 NECTIN1Q15223 517 aa24.9■■□□□ 1.58
NEIL3-202ENST00000513321 MANSC4A6NHS7 340 aaPredicted RBP24.89■■□□□ 1.57
NEIL3-202ENST00000513321 TSPY3P0CV98 308 aa24.89■■□□□ 1.57
NEIL3-202ENST00000513321 TSPY8P0CW00 308 aa24.89■■□□□ 1.57
NEIL3-202ENST00000513321 CEP350Q5VT06 3117 aa24.89■■□□□ 1.57
NEIL3-202ENST00000513321 NEDD1Q8NHV4 660 aa24.88■■□□□ 1.57
NEIL3-202ENST00000513321 KANSL2Q9H9L4 492 aa24.88■■□□□ 1.57
NEIL3-202ENST00000513321 TAF6LQ9Y6J9 622 aa24.88■■□□□ 1.57
NEIL3-202ENST00000513321 ATAD5Q96QE3 1844 aa24.88■■□□□ 1.57
NEIL3-202ENST00000513321 NEDD4P46934 1319 aa24.88■■□□□ 1.57
NEIL3-202ENST00000513321 TSPY2A6NKD2 308 aa24.87■■□□□ 1.57
NEIL3-202ENST00000513321 SLC27A2O14975 620 aa24.87■■□□□ 1.57
NEIL3-202ENST00000513321 INHBEP58166 350 aa24.87■■□□□ 1.57
NEIL3-202ENST00000513321 CREB3L3Q68CJ9 461 aa24.87■■□□□ 1.57
NEIL3-202ENST00000513321 CLEC10AQ8IUN9 316 aa24.87■■□□□ 1.57
NEIL3-202ENST00000513321 CCL15-CCL14A0A0B4J2E2 113 aa24.86■■□□□ 1.57
NEIL3-202ENST00000513321 CETPP11597 493 aa24.86■■□□□ 1.57
NEIL3-202ENST00000513321 CCL15Q16663 113 aa24.86■■□□□ 1.57
NEIL3-202ENST00000513321 SIAH1Q8IUQ4 282 aa24.86■■□□□ 1.57
NEIL3-202ENST00000513321 NKX2-3Q8TAU0 364 aa24.86■■□□□ 1.57
NEIL3-202ENST00000513321 ACER1Q8TDN7 264 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms