RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 BACE1P56817 501 aa23.15■■□□□ 1.3
MATR3-221ENST00000513121 SH3TC2Q8TF17 1288 aa23.15■■□□□ 1.3
MATR3-221ENST00000513121 TBC1D2Q9BYX2 928 aa23.15■■□□□ 1.3
MATR3-221ENST00000513121 EHD4Q9H223 541 aa23.15■■□□□ 1.3
MATR3-221ENST00000513121 AS3MTQ9HBK9 375 aa23.15■■□□□ 1.3
MATR3-221ENST00000513121 ECHDC1Q9NTX5 307 aa23.15■■□□□ 1.3
MATR3-221ENST00000513121 SRRDQ9UH36 339 aa23.15■■□□□ 1.3
MATR3-221ENST00000513121 SERPINB13Q9UIV8 391 aa23.15■■□□□ 1.3
MATR3-221ENST00000513121 SHMT1P34896 483 aa23.14■■□□□ 1.29
MATR3-221ENST00000513121 TTC6Q86TZ1 520 aa23.14■■□□□ 1.29
MATR3-221ENST00000513121 CRNKL1Q9BZJ0 848 aaKnown RBP23.14■■□□□ 1.29
MATR3-221ENST00000513121 DCP1AQ9NPI6 582 aaPredicted RBP23.14■■□□□ 1.29
MATR3-221ENST00000513121 SMIM22K7EJ46 135 aa23.13■■□□□ 1.29
MATR3-221ENST00000513121 MBD4O95243 580 aa23.13■■□□□ 1.29
MATR3-221ENST00000513121 MYCP01106 439 aaPredicted RBP23.13■■□□□ 1.29
MATR3-221ENST00000513121 GNRH1P01148 92 aa23.13■■□□□ 1.29
MATR3-221ENST00000513121 GABPAQ06546 454 aa23.13■■□□□ 1.29
MATR3-221ENST00000513121 SLC9C1Q4G0N8 1177 aa23.13■■□□□ 1.29
MATR3-221ENST00000513121 SMCR8Q8TEV9 937 aaPredicted RBP23.13■■□□□ 1.29
MATR3-221ENST00000513121 MCM9Q9NXL9 1143 aa23.13■■□□□ 1.29
MATR3-221ENST00000513121 CDK5RAP2Q96SN8 1893 aa23.13■■□□□ 1.29
MATR3-221ENST00000513121 BRCA2P51587 3418 aa23.13■■□□□ 1.29
MATR3-221ENST00000513121 POLR3DP05423 398 aaPredicted RBP23.12■■□□□ 1.29
MATR3-221ENST00000513121 ANKRD13CQ8N6S4 541 aa23.12■■□□□ 1.29
MATR3-221ENST00000513121 OTUD7AQ8TE49 926 aaPredicted RBP23.12■■□□□ 1.29
MATR3-221ENST00000513121 ASCC2Q9H1I8 757 aaPredicted RBP23.12■■□□□ 1.29
MATR3-221ENST00000513121 GINM1Q9NU53 330 aa23.12■■□□□ 1.29
MATR3-221ENST00000513121 GABRQQ9UN88 632 aa23.12■■□□□ 1.29
MATR3-221ENST00000513121 EN2P19622 333 aaPredicted RBP23.11■■□□□ 1.29
MATR3-221ENST00000513121 PRKCZQ05513 592 aa23.11■■□□□ 1.29
MATR3-221ENST00000513121 UBE3CQ15386 1083 aa23.11■■□□□ 1.29
MATR3-221ENST00000513121 PUS7LQ9H0K6 701 aaKnown RBP23.11■■□□□ 1.29
MATR3-221ENST00000513121 EMILIN3Q9NT22 766 aa23.11■■□□□ 1.29
MATR3-221ENST00000513121 FOCADQ5VW36 1801 aa23.1■■□□□ 1.29
MATR3-221ENST00000513121 USP17L10C9JJH3 530 aa23.1■■□□□ 1.29
MATR3-221ENST00000513121 PEX10O60683 326 aa23.1■■□□□ 1.29
MATR3-221ENST00000513121 GUCY1A2P33402 732 aa23.1■■□□□ 1.29
MATR3-221ENST00000513121 PRMT2P55345 433 aa23.1■■□□□ 1.29
MATR3-221ENST00000513121 FCGRTP55899 365 aa23.1■■□□□ 1.29
MATR3-221ENST00000513121 CERKLQ49MI3 558 aaPredicted RBP23.1■■□□□ 1.29
MATR3-221ENST00000513121 SLC44A5Q8NCS7 719 aa23.1■■□□□ 1.29
MATR3-221ENST00000513121 P2RX7Q99572 595 aaKnown RBP23.1■■□□□ 1.29
MATR3-221ENST00000513121 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.1■■□□□ 1.29
MATR3-221ENST00000513121 KIAA0100Q14667 2235 aaKnown RBP23.1■■□□□ 1.29
MATR3-221ENST00000513121 PTPRFP10586 1907 aa23.1■■□□□ 1.29
MATR3-221ENST00000513121 MYPNQ86TC9 1320 aa23.09■■□□□ 1.29
MATR3-221ENST00000513121 HOXD10P28358 340 aa23.09■■□□□ 1.29
MATR3-221ENST00000513121 ACER1Q8TDN7 264 aa23.09■■□□□ 1.29
MATR3-221ENST00000513121 DYNLL2Q96FJ2 89 aa23.09■■□□□ 1.29
MATR3-221ENST00000513121 TMOD4Q9NZQ9 345 aa23.09■■□□□ 1.29
MATR3-221ENST00000513121 PNMA3Q9UL41 463 aa23.09■■□□□ 1.29
MATR3-221ENST00000513121 CYP2D7A0A087X1C5 515 aa23.08■■□□□ 1.29
MATR3-221ENST00000513121 C19orf81C9J6K1 198 aa23.08■■□□□ 1.29
MATR3-221ENST00000513121 HOXA7P31268 230 aaPredicted RBP23.08■■□□□ 1.29
MATR3-221ENST00000513121 RAB3GAP1Q15042 981 aa23.08■■□□□ 1.29
MATR3-221ENST00000513121 ABCB5Q2M3G0 1257 aa23.08■■□□□ 1.29
MATR3-221ENST00000513121 POTEEQ6S8J3 1075 aa23.08■■□□□ 1.29
MATR3-221ENST00000513121 NBPF11Q86T75 865 aa23.08■■□□□ 1.29
MATR3-221ENST00000513121 MTFR1Q15390 333 aa23.07■■□□□ 1.28
MATR3-221ENST00000513121 FAM110CQ1W6H9 321 aa23.07■■□□□ 1.28
MATR3-221ENST00000513121 RAET1EQ8TD07 263 aa23.07■■□□□ 1.28
MATR3-221ENST00000513121 PABPC4Q13310 644 aaKnown RBP eCLIP23.06■■□□□ 1.28
MATR3-221ENST00000513121 ZYXQ15942 572 aaKnown RBP23.06■■□□□ 1.28
MATR3-221ENST00000513121 KBTBD3Q8NAB2 608 aa23.06■■□□□ 1.28
MATR3-221ENST00000513121 TXNRD2Q9NNW7 524 aa23.06■■□□□ 1.28
MATR3-221ENST00000513121 ATP8A2Q9NTI2 1148 aa23.06■■□□□ 1.28
MATR3-221ENST00000513121 GRK4P32298 578 aa23.05■■□□□ 1.28
MATR3-221ENST00000513121 GCLCP48506 637 aaPredicted RBP23.05■■□□□ 1.28
MATR3-221ENST00000513121 FLT3LGP49771 235 aa23.05■■□□□ 1.28
MATR3-221ENST00000513121 SEPT2Q15019 361 aa23.05■■□□□ 1.28
MATR3-221ENST00000513121 USP17L2Q6R6M4 530 aa23.05■■□□□ 1.28
MATR3-221ENST00000513121 PI4K2BQ8TCG2 481 aa23.05■■□□□ 1.28
MATR3-221ENST00000513121 OSBP2Q969R2 916 aa23.05■■□□□ 1.28
MATR3-221ENST00000513121 TMEM106CQ9BVX2 250 aa23.05■■□□□ 1.28
MATR3-221ENST00000513121 SLC4A4Q9Y6R1 1079 aa23.05■■□□□ 1.28
MATR3-221ENST00000513121 TNRC18O15417 2968 aaPredicted RBP23.04■■□□□ 1.28
MATR3-221ENST00000513121 ATAD5Q96QE3 1844 aa23.04■■□□□ 1.28
MATR3-221ENST00000513121 USP17L12C9JPN9 530 aa23.04■■□□□ 1.28
MATR3-221ENST00000513121 USP17L21D6R901 530 aa23.04■■□□□ 1.28
MATR3-221ENST00000513121 TNPO2O14787 897 aaKnown RBP23.04■■□□□ 1.28
MATR3-221ENST00000513121 IRX3P78415 501 aaPredicted RBP23.04■■□□□ 1.28
MATR3-221ENST00000513121 C12orf60Q5U649 245 aa23.04■■□□□ 1.28
MATR3-221ENST00000513121 ZSCAN25Q6NSZ9 544 aa23.04■■□□□ 1.28
MATR3-221ENST00000513121 STRBPQ96SI9 672 aaKnown RBP23.04■■□□□ 1.28
MATR3-221ENST00000513121 CABP5Q9NP86 173 aa23.04■■□□□ 1.28
MATR3-221ENST00000513121 MYH1P12882 1939 aa23.04■■□□□ 1.28
MATR3-221ENST00000513121 MKI67P46013 3256 aaKnown RBP23.04■■□□□ 1.28
MATR3-221ENST00000513121 DDX60LQ5H9U9 1706 aaKnown RBP23.03■■□□□ 1.28
MATR3-221ENST00000513121 A0A1W2PRG0 241 aa23.03■■□□□ 1.28
MATR3-221ENST00000513121 GPATCH3Q96I76 525 aa23.03■■□□□ 1.28
MATR3-221ENST00000513121 C12orf42Q96LP6 360 aa23.03■■□□□ 1.28
MATR3-221ENST00000513121 RBPJLQ9UBG7 517 aa23.03■■□□□ 1.28
MATR3-221ENST00000513121 MORF4L1Q9UBU8 362 aa23.03■■□□□ 1.28
MATR3-221ENST00000513121 LOC285556D6RIA3 1793 aa23.03■■□□□ 1.28
MATR3-221ENST00000513121 PDE4DIPQ5VU43 2346 aa23.03■■□□□ 1.28
MATR3-221ENST00000513121 RNF113AO15541 343 aaKnown RBP23.02■■□□□ 1.28
MATR3-221ENST00000513121 AKR1B1P15121 316 aa23.02■■□□□ 1.28
MATR3-221ENST00000513121 HERVK_113P62684 666 aa23.02■■□□□ 1.28
MATR3-221ENST00000513121 Q3C1V9 767 aa23.02■■□□□ 1.28
MATR3-221ENST00000513121 CTR9Q6PD62 1173 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms