RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 TROAPQ12815 778 aa14.42□□□□□ -0.1
RACK1-229ENST00000513027 APOBEC3HQ6NTF7 200 aaKnown RBP14.42□□□□□ -0.1
RACK1-229ENST00000513027 USP48Q86UV5 1035 aa14.42□□□□□ -0.1
RACK1-229ENST00000513027 CRACR2BQ8N4Y2 399 aaPredicted RBP14.42□□□□□ -0.1
RACK1-229ENST00000513027 NEDD1Q8NHV4 660 aa14.42□□□□□ -0.1
RACK1-229ENST00000513027 CTCFLQ8NI51 663 aaPredicted RBP14.42□□□□□ -0.1
RACK1-229ENST00000513027 CCDC17Q96LX7 622 aa14.42□□□□□ -0.1
RACK1-229ENST00000513027 LZTS2Q9BRK4 669 aa14.42□□□□□ -0.1
RACK1-229ENST00000513027 ALG1Q9BT22 464 aa14.42□□□□□ -0.1
RACK1-229ENST00000513027 KAT14Q9H8E8 782 aa14.42□□□□□ -0.1
RACK1-229ENST00000513027 FAM217BQ9NTX9 383 aaPredicted RBP14.42□□□□□ -0.1
RACK1-229ENST00000513027 PLIN4Q96Q06 1357 aa14.42□□□□□ -0.1
RACK1-229ENST00000513027 COL2A1P02458 1487 aaPredicted RBP14.42□□□□□ -0.1
RACK1-229ENST00000513027 LTBP3Q9NS15 1303 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 ENTPD3O75355 529 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 WDHD1O75717 1129 aaPredicted RBP14.41□□□□□ -0.1
RACK1-229ENST00000513027 VIL1P09327 827 aaKnown RBP14.41□□□□□ -0.1
RACK1-229ENST00000513027 RASA1P20936 1047 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 CDC27P30260 824 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 CDK8P49336 464 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 DNM1Q05193 864 aaKnown RBP14.41□□□□□ -0.1
RACK1-229ENST00000513027 SAFBQ15424 915 aaKnown RBP eCLIP14.41□□□□□ -0.1
RACK1-229ENST00000513027 L1TD1Q5T7N2 865 aaKnown RBP14.41□□□□□ -0.1
RACK1-229ENST00000513027 CDC42EP5Q6NZY7 148 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 LARGE2Q8N3Y3 721 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 AGBL3Q8NEM8 1001 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 ZKSCAN3Q9BRR0 538 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 OSBPL5Q9H0X9 879 aaPredicted RBP14.41□□□□□ -0.1
RACK1-229ENST00000513027 SERPINB13Q9UIV8 391 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 ZNRF3Q9ULT6 936 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 MYH1P12882 1939 aa14.41□□□□□ -0.1
RACK1-229ENST00000513027 PRPF3O43395 683 aaKnown RBP14.4□□□□□ -0.1
RACK1-229ENST00000513027 PRDM1O75626 825 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 CYP2D6P10635 497 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 SMARCA1P28370 1054 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 NOVP48745 357 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 PLCD1P51178 756 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 GABPAQ06546 454 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.1
RACK1-229ENST00000513027 FOXP4Q8IVH2 680 aaPredicted RBP14.4□□□□□ -0.1
RACK1-229ENST00000513027 NIM1KQ8IY84 436 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 OGFOD1Q8N543 542 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 UPF1Q92900 1129 aaKnown RBP eCLIP14.4□□□□□ -0.1
RACK1-229ENST00000513027 SENP2Q9HC62 589 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 CNPY2Q9Y2B0 182 aa14.4□□□□□ -0.1
RACK1-229ENST00000513027 ZNF646O15015 1829 aaPredicted RBP14.4□□□□□ -0.1
RACK1-229ENST00000513027 GOLGA6L4A6NEF3 574 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 F8W031 263 aaPredicted RBP14.39□□□□□ -0.11
RACK1-229ENST00000513027 ZBTB7AO95365 584 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 FKBP1CQ5VVH2 108 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 RCSD1Q6JBY9 416 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 FERMT3Q86UX7 667 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 MTMR14Q8NCE2 650 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 NKX2-3Q8TAU0 364 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 NUP133Q8WUM0 1156 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 SPATA32Q96LK8 384 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 SGIP1Q9BQI5 828 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 SLC26A6Q9BXS9 759 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
RACK1-229ENST00000513027 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
RACK1-229ENST00000513027 ECM29Q5VYK3 1845 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 U2AF2P26368 475 aaKnown RBP eCLIP14.38□□□□□ -0.11
RACK1-229ENST00000513027 SCNN1DP51172 638 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 ZNF445P59923 1031 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 TNIP1Q15025 636 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 NBPF11Q86T75 865 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 KIAA0825Q8IV33 1275 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 STK11IPQ8N1F8 1099 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 PNMA1Q8ND90 353 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 JDP2Q8WYK2 163 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 TAOK3Q9H2K8 898 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 PI4KBQ9UBF8 816 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 SAP30BPQ9UHR5 308 aaKnown RBP14.38□□□□□ -0.11
RACK1-229ENST00000513027 RCOR1Q9UKL0 485 aa14.38□□□□□ -0.11
RACK1-229ENST00000513027 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
RACK1-229ENST00000513027 ATRNL1Q5VV63 1379 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 SCN9AQ15858 1988 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 YDJCA8MPS7 323 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 FIBPO43427 364 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 YEATS4O95619 227 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 TOP1P11387 765 aaKnown RBP14.37□□□□□ -0.11
RACK1-229ENST00000513027 RPS12P25398 132 aaKnown RBP14.37□□□□□ -0.11
RACK1-229ENST00000513027 RBM5P52756 815 aaKnown RBP eCLIP14.37□□□□□ -0.11
RACK1-229ENST00000513027 FAM47AQ5JRC9 791 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 KRT40Q6A162 431 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 TMTC3Q6ZXV5 915 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 LEO1Q8WVC0 666 aaPredicted RBP14.37□□□□□ -0.11
RACK1-229ENST00000513027 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 GMLQ99445 158 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 MYL10Q9BUA6 226 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 FOXP1Q9H334 677 aaPredicted RBP14.37□□□□□ -0.11
RACK1-229ENST00000513027 SH3GLB2Q9NR46 395 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 IL17RBQ9NRM6 502 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 RTEL1Q9NZ71 1219 aa14.37□□□□□ -0.11
RACK1-229ENST00000513027 BRCA1P38398 1863 aaKnown RBP14.37□□□□□ -0.11
RACK1-229ENST00000513027 GOLGA6L3A6NEY3 463 aa14.36□□□□□ -0.11
RACK1-229ENST00000513027 RXRAP19793 462 aa14.36□□□□□ -0.11
RACK1-229ENST00000513027 KIF23Q02241 960 aaPredicted RBP14.36□□□□□ -0.11
RACK1-229ENST00000513027 FUT2Q10981 343 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms