RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TMEM40Q8WWA1 233 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 ISL2Q96A47 359 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 TP53INP1Q96A56 240 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 TM9SF2Q99805 663 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 FOXQ1Q9C009 403 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 ZNF408Q9H9D4 720 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 FAM105AQ9NUU6 356 aa6.28□□□□□ -1.4
HTT-210ENST00000512909 SMAD7O15105 426 aaKnown RBP6.27□□□□□ -1.41
HTT-210ENST00000512909 NFICP08651 508 aa6.27□□□□□ -1.41
HTT-210ENST00000512909 ETFBP38117 255 aa6.27□□□□□ -1.41
HTT-210ENST00000512909 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.27□□□□□ -1.41
HTT-210ENST00000512909 BEND4Q6ZU67 534 aa6.27□□□□□ -1.41
HTT-210ENST00000512909 NLRC3Q7RTR2 1065 aa6.27□□□□□ -1.41
HTT-210ENST00000512909 MCATQ8IVS2 390 aaKnown RBP6.27□□□□□ -1.41
HTT-210ENST00000512909 MFSD2AQ8NA29 543 aa6.27□□□□□ -1.41
HTT-210ENST00000512909 DHRS1Q96LJ7 313 aa6.27□□□□□ -1.41
HTT-210ENST00000512909 CCDC74BQ96LY2 380 aa6.27□□□□□ -1.41
HTT-210ENST00000512909 PCDHGC5Q9Y5F6 944 aa6.27□□□□□ -1.41
HTT-210ENST00000512909 FAM86C2PA6NEL3 165 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 C1QTNF9BB2RNN3 333 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 LRIG2O94898 1065 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 CYP7A1P22680 504 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 GIPRP48546 466 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 KCNMA1Q12791 1236 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 FXNQ16595 210 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 SGO2Q562F6 1265 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 TMEM201Q5SNT2 666 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 NBPF6Q5VWK0 638 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 OVOS1Q6IE37 1185 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 ZNF746Q6NUN9 644 aaPredicted RBP6.26□□□□□ -1.41
HTT-210ENST00000512909 MRFAP1L1Q96HT8 127 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 FAM46AQ96IP4 442 aaKnown RBP6.26□□□□□ -1.41
HTT-210ENST00000512909 DCAF5Q96JK2 942 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 MYRFLQ96LU7 910 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 NBPF4Q96M43 638 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 STOML1Q9UBI4 398 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 TPX2Q9ULW0 747 aaKnown RBP6.26□□□□□ -1.41
HTT-210ENST00000512909 NCAPD3P42695 1498 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 ATAD2BQ9ULI0 1458 aa6.26□□□□□ -1.41
HTT-210ENST00000512909 PRR36Q9H6K5 1346 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 SLC22A31A6NKX4 558 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 CHURC1-FNTBB4DL54 471 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 IGSF3O75054 1194 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 DDAH1O94760 285 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 CST3P01034 146 aaPredicted RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 GUCY2CP25092 1073 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 ETV3P41162 512 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 NFE2L2Q16236 605 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 BBS9Q3SYG4 887 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 PRAMEF13Q5VWM6 474 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 CDPF1Q6NVV7 123 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 ARMCX6Q7L4S7 300 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 LSRQ86X29 649 aaPredicted RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 CLEC10AQ8IUN9 316 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 FAM20CQ8IXL6 584 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 MRPL41Q8IXM3 137 aaKnown RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 TMEM151AQ8N4L1 468 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 RBBP8NLQ8NC74 664 aaPredicted RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 HNRNPLLQ8WVV9 542 aaKnown RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 ACSF2Q96CM8 615 aaPredicted RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 SHDQ96IW2 340 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 MEGF10Q96KG7 1140 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 MIPEPQ99797 713 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 DPH2Q9BQC3 489 aaPredicted RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 CWC22Q9HCG8 908 aaKnown RBP6.25□□□□□ -1.41
HTT-210ENST00000512909 TJP2Q9UDY2 1190 aa6.25□□□□□ -1.41
HTT-210ENST00000512909 ERCC6Q03468 1493 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 BAZ1BQ9UIG0 1483 aaKnown RBP6.24□□□□□ -1.41
HTT-210ENST00000512909 CCDC85CA6NKD9 419 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 UPK3BL1B0FP48 263 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 UPK3BL2E5RIL1 263 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 CLEC3AO75596 197 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 GDF11O95390 407 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 NEFMP07197 916 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 NAT2P11245 290 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 NME1P15531 152 aaKnown RBP6.24□□□□□ -1.41
HTT-210ENST00000512909 RASSF7Q02833 373 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 Q6ZS46 218 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 ATG4CQ96DT6 458 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 KIF2CQ99661 725 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 ACSS3Q9H6R3 686 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 ZSWIM4Q9H7M6 989 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 ATG3Q9NT62 314 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 SIRPGQ9P1W8 387 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 RAXQ9Y2V3 346 aa6.24□□□□□ -1.41
HTT-210ENST00000512909 BAZ1AQ9NRL2 1556 aaPredicted RBP6.23□□□□□ -1.41
HTT-210ENST00000512909 KRBA1A5PL33 1030 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 MEIS3P2A8K0S8 358 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 CCNFP41002 786 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 CHRNA4P43681 627 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 RNF4P78317 190 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 CYP27A1Q02318 531 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 RING1Q06587 406 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 IFRD2Q12894 506 aaPredicted RBP6.23□□□□□ -1.41
HTT-210ENST00000512909 CYP27C1Q4G0S4 372 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 DUSP27Q5VZP5 1158 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 CD163Q86VB7 1156 aa6.23□□□□□ -1.41
HTT-210ENST00000512909 C19orf47Q8N9M1 422 aaKnown RBP6.23□□□□□ -1.41
HTT-210ENST00000512909 CYB5D2Q8WUJ1 264 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms