RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 FAM47AQ5JRC9 791 aa28.36■■■□□ 2.13
SPOCK3-221ENST00000512648 ATL3Q6DD88 541 aa28.36■■■□□ 2.13
SPOCK3-221ENST00000512648 RCSD1Q6JBY9 416 aa28.36■■■□□ 2.13
SPOCK3-221ENST00000512648 OSBPL5Q9H0X9 879 aaPredicted RBP28.36■■■□□ 2.13
SPOCK3-221ENST00000512648 ZNF277Q9NRM2 450 aaPredicted RBP28.36■■■□□ 2.13
SPOCK3-221ENST00000512648 FOCADQ5VW36 1801 aa28.36■■■□□ 2.13
SPOCK3-221ENST00000512648 CDK5RAP2Q96SN8 1893 aa28.36■■■□□ 2.13
SPOCK3-221ENST00000512648 FMNL1O95466 1100 aaPredicted RBP28.35■■■□□ 2.13
SPOCK3-221ENST00000512648 MMP14P50281 582 aa28.35■■■□□ 2.13
SPOCK3-221ENST00000512648 RAB11FIP4Q86YS3 637 aa28.35■■■□□ 2.13
SPOCK3-221ENST00000512648 NEDD1Q8NHV4 660 aa28.35■■■□□ 2.13
SPOCK3-221ENST00000512648 WASF1Q92558 559 aa28.35■■■□□ 2.13
SPOCK3-221ENST00000512648 DDX4Q9NQI0 724 aaKnown RBP28.35■■■□□ 2.13
SPOCK3-221ENST00000512648 LTBP3Q9NS15 1303 aa28.35■■■□□ 2.13
SPOCK3-221ENST00000512648 NOVP48745 357 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 SSRP1Q08945 709 aaKnown RBP28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 C8orf76Q96K31 380 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 MYL10Q9BUA6 226 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 EHD4Q9H223 541 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 DHX36Q9H2U1 1008 aaKnown RBP28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 SWAP70Q9UH65 585 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 MBD3O95983 291 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 RXRAP19793 462 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 KRT85P78386 507 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 GSE1Q14687 1217 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 NIM1KQ8IY84 436 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 CRACR2BQ8N4Y2 399 aaPredicted RBP28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 CHAMP1Q96JM3 812 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 IL17RBQ9NRM6 502 aa28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 DDX49Q9Y6V7 483 aaKnown RBP28.34■■■□□ 2.13
SPOCK3-221ENST00000512648 TSPY3P0CV98 308 aa28.33■■■□□ 2.13
SPOCK3-221ENST00000512648 TSPY8P0CW00 308 aa28.33■■■□□ 2.13
SPOCK3-221ENST00000512648 DNM1Q05193 864 aaKnown RBP28.33■■■□□ 2.13
SPOCK3-221ENST00000512648 NBPF11Q86T75 865 aa28.33■■■□□ 2.13
SPOCK3-221ENST00000512648 USP48Q86UV5 1035 aa28.33■■■□□ 2.13
SPOCK3-221ENST00000512648 AGBL3Q8NEM8 1001 aa28.33■■■□□ 2.13
SPOCK3-221ENST00000512648 PSME4Q14997 1843 aa28.32■■■□□ 2.12
SPOCK3-221ENST00000512648 SCAND2PQ9GZW5 306 aaPredicted RBP28.32■■■□□ 2.12
SPOCK3-221ENST00000512648 TAOK3Q9H2K8 898 aa28.32■■■□□ 2.12
SPOCK3-221ENST00000512648 CNPY2Q9Y2B0 182 aa28.32■■■□□ 2.12
SPOCK3-221ENST00000512648 FERMT3Q86UX7 667 aa28.31■■■□□ 2.12
SPOCK3-221ENST00000512648 TRIM22Q8IYM9 498 aa28.31■■■□□ 2.12
SPOCK3-221ENST00000512648 ELP1O95163 1332 aa28.31■■■□□ 2.12
SPOCK3-221ENST00000512648 BRCA1P38398 1863 aaKnown RBP28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 PLIN4Q96Q06 1357 aa28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 PICALMQ13492 652 aa28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 CCDC144CPQ8IYA2 1237 aa28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 SLC44A5Q8NCS7 719 aa28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 NUP133Q8WUM0 1156 aa28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 ALG1Q9BT22 464 aa28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 RNF26Q9BY78 433 aaPredicted RBP28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 SERPINB13Q9UIV8 391 aa28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 HDAC9Q9UKV0 1011 aa28.3■■■□□ 2.12
SPOCK3-221ENST00000512648 PSMD14O00487 310 aa28.29■■■□□ 2.12
SPOCK3-221ENST00000512648 ENTPD3O75355 529 aa28.29■■■□□ 2.12
SPOCK3-221ENST00000512648 DEXIO95424 95 aa28.29■■■□□ 2.12
SPOCK3-221ENST00000512648 HLA-DOAP06340 250 aa28.29■■■□□ 2.12
SPOCK3-221ENST00000512648 FUT2Q10981 343 aa28.29■■■□□ 2.12
SPOCK3-221ENST00000512648 CFAP100Q494V2 611 aa28.29■■■□□ 2.12
SPOCK3-221ENST00000512648 MTMR14Q8NCE2 650 aa28.29■■■□□ 2.12
SPOCK3-221ENST00000512648 NMT2O60551 498 aa28.28■■■□□ 2.12
SPOCK3-221ENST00000512648 NCLP19338 710 aaKnown RBP28.28■■■□□ 2.12
SPOCK3-221ENST00000512648 KAT14Q9H8E8 782 aa28.28■■■□□ 2.12
SPOCK3-221ENST00000512648 CFAP45Q9UL16 551 aa28.28■■■□□ 2.12
SPOCK3-221ENST00000512648 COL2A1P02458 1487 aaPredicted RBP28.28■■■□□ 2.12
SPOCK3-221ENST00000512648 COL4A5P29400 1685 aa28.28■■■□□ 2.12
SPOCK3-221ENST00000512648 PRPF3O43395 683 aaKnown RBP28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 RBM5P52756 815 aaKnown RBP eCLIP28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 SLC4A8Q2Y0W8 1093 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 BRAPQ7Z569 592 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 PHKBQ93100 1093 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 SLC26A6Q9BXS9 759 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 FAM198AQ9UFP1 575 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 NFKBIEO00221 500 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 KIF5BP33176 963 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 UBE2HP62256 183 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 NFIAQ12857 509 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 FOXD4L6Q3SYB3 417 aaPredicted RBP28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 FOXD4L3Q6VB84 417 aaPredicted RBP28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 METTL16Q86W50 562 aaKnown RBP28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 CTCFLQ8NI51 663 aaPredicted RBP28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 GPT2Q8TD30 523 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 MYH1P12882 1939 aa28.27■■■□□ 2.12
SPOCK3-221ENST00000512648 PSDA5PKW4 1024 aaPredicted RBP28.26■■■□□ 2.11
SPOCK3-221ENST00000512648 RAD17O75943 681 aa28.26■■■□□ 2.11
SPOCK3-221ENST00000512648 TMTC3Q6ZXV5 915 aa28.26■■■□□ 2.11
SPOCK3-221ENST00000512648 FOXP4Q8IVH2 680 aaPredicted RBP28.26■■■□□ 2.11
SPOCK3-221ENST00000512648 JDP2Q8WYK2 163 aa28.26■■■□□ 2.11
SPOCK3-221ENST00000512648 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 GNAQP50148 359 aa28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 CXCL9Q07325 125 aa28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 OGFOD1Q8N543 542 aa28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 PRMT6Q96LA8 375 aaPredicted RBP28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 CCDC17Q96LX7 622 aa28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 ZNF396Q96N95 335 aaPredicted RBP28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 PI4KBQ9UBF8 816 aa28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 ATRNL1Q5VV63 1379 aa28.25■■■□□ 2.11
SPOCK3-221ENST00000512648 IGKV6D-41A0A0C4DH26 115 aa28.24■■■□□ 2.11
SPOCK3-221ENST00000512648 SPDYE2BA6NHP3 402 aa28.24■■■□□ 2.11
SPOCK3-221ENST00000512648 SPDYE6P0CI01 402 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms