RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 GOLGA6L1Q8N7Z2 621 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 SEPT11Q9NVA2 429 aaKnown RBP13.57□□□□□ -0.24
PRDM16-207ENST00000512462 DYNC1I1O14576 645 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 PLEKHA8P1O95397 391 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 NAA30Q147X3 362 aaPredicted RBP13.57□□□□□ -0.24
PRDM16-207ENST00000512462 UBE3CQ15386 1083 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 MFSD14BQ5SR56 506 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 FKBP15Q5T1M5 1219 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 CTNND2Q9UQB3 1225 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 PCDHB6Q9Y5E3 794 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 PPARDQ03181 441 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 TCERG1LQ5VWI1 586 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 FRMPD2Q68DX3 1309 aaPredicted RBP13.57□□□□□ -0.24
PRDM16-207ENST00000512462 PALLDQ8WX93 1383 aa13.57□□□□□ -0.24
PRDM16-207ENST00000512462 FOXN1O15353 648 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
PRDM16-207ENST00000512462 TXKP42681 527 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 TDRD12Q587J7 1177 aaKnown RBP13.56□□□□□ -0.24
PRDM16-207ENST00000512462 RILPL1Q5EBL4 403 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 TTC38Q5R3I4 469 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 GPR108Q9NPR9 543 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 PUF60Q9UHX1 559 aaKnown RBP13.56□□□□□ -0.24
PRDM16-207ENST00000512462 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 NCAPD2Q15021 1401 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 KIF1AQ12756 1690 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 SMIM22K7EJ46 135 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 TRIM37O94972 964 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
PRDM16-207ENST00000512462 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 HINFPQ9BQA5 517 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 PKD2L1Q9P0L9 805 aa13.56□□□□□ -0.24
PRDM16-207ENST00000512462 USP17L3A6NCW0 530 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 USP17L4A6NCW7 530 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 FAM205CA6NFA0 338 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 TRIM21P19474 475 aaKnown RBP13.55□□□□□ -0.24
PRDM16-207ENST00000512462 CASQ1P31415 396 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 DMTNQ08495 405 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 INF2Q27J81 1249 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 TBC1D9BQ66K14 1250 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 USP17L1Q7RTZ2 530 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 RCOR1Q9UKL0 485 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 N4BP2Q86UW6 1770 aaPredicted RBP13.55□□□□□ -0.24
PRDM16-207ENST00000512462 SH2B2O14492 632 aaPredicted RBP13.55□□□□□ -0.24
PRDM16-207ENST00000512462 POSTNQ15063 836 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
PRDM16-207ENST00000512462 VEZTQ9HBM0 779 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
PRDM16-207ENST00000512462 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 CTDNEP1O95476 244 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 YEATS4O95619 227 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 CAVIN2O95810 425 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 KIAA0825Q8IV33 1275 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 TAB2Q9NYJ8 693 aa13.55□□□□□ -0.24
PRDM16-207ENST00000512462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.54□□□□□ -0.24
PRDM16-207ENST00000512462 MYO1BO43795 1136 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 ITPK1Q13572 414 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 NCOA3Q9Y6Q9 1424 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 DTHD1Q6ZMT9 781 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
PRDM16-207ENST00000512462 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 ZSCAN12O43309 604 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 CCNT1O60563 726 aaKnown RBP13.54□□□□□ -0.24
PRDM16-207ENST00000512462 PTGDRQ13258 359 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 CACNA2D4Q7Z3S7 1137 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 CSRNP2Q9H175 543 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
PRDM16-207ENST00000512462 BIN2Q9UBW5 565 aaPredicted RBP13.54□□□□□ -0.24
PRDM16-207ENST00000512462 ZNF804BA4D1E1 1349 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 CAMTA1Q9Y6Y1 1673 aa13.54□□□□□ -0.24
PRDM16-207ENST00000512462 KLRK1P26718 216 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 CACNB3P54284 484 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 NLRP12P59046 1061 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 CCDC144BQ3MJ40 725 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 PXDNLA1KZ92 1463 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 KIF5CO60282 957 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 MECOMQ03112 1051 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 ELF2Q15723 593 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 CLEC17AQ6ZS10 378 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 MB21D2Q8IYB1 491 aaPredicted RBP13.53□□□□□ -0.24
PRDM16-207ENST00000512462 ANKRD2Q9GZV1 360 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 MST1RQ04912 1400 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 ANTXR2P58335 489 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 UBXN1Q04323 297 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 MTERF4Q7Z6M4 381 aaKnown RBP13.53□□□□□ -0.24
PRDM16-207ENST00000512462 FCHSD1Q86WN1 690 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms