RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 ZSCAN23Q3MJ62 389 aa15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 TMEM67Q5HYA8 995 aa15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 CAVIN1Q6NZI2 390 aaKnown RBP15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 C7orf43Q8WVR3 580 aa15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 JDP2Q8WYK2 163 aa15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 ESR2Q92731 530 aa15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 CD209Q9NNX6 404 aa15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 NSFL1CQ9UNZ2 370 aaKnown RBP15.31■□□□□ 0.04
DEPDC1B-206ENST00000512452 ERICH2A1L162 156 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 IFIT3O14879 490 aaKnown RBP15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 ZBTB43O43298 467 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 KDM4AO75164 1064 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 SLC3A2P08195 630 aaKnown RBP15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 SRGNP10124 158 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 KCNA4P22459 653 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 METAP2P50579 478 aaKnown RBP eCLIP15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 DNM1Q05193 864 aaKnown RBP15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 SYNE3Q6ZMZ3 975 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 FAM205AQ6ZU69 1335 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 SLF2Q8IX21 1173 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 TBC1D16Q8TBP0 767 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 DDX11Q96FC9 970 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 NCOA5Q9HCD5 579 aaKnown RBP15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 GPHNQ9NQX3 736 aaPredicted RBP15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 ZSWIM5Q9P217 1185 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 ARPP21Q9UBL0 812 aaPredicted RBP15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 CFAP45Q9UL16 551 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 SUGT1Q9Y2Z0 365 aa15.3■□□□□ 0.04
DEPDC1B-206ENST00000512452 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 STK36Q9NRP7 1315 aa15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 CCDC69A6NI79 296 aa15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 ORC4O43929 436 aa15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 BAG3O95817 575 aa15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 PRDX5P30044 214 aa15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 DYNLL1P63167 89 aaKnown RBP15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 MASTLQ96GX5 879 aa15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 NOL10Q9BSC4 688 aaKnown RBP15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
DEPDC1B-206ENST00000512452 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 FIBPO43427 364 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 PLCG2P16885 1265 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 EN2P19622 333 aaPredicted RBP15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 ZNF157P51786 506 aaPredicted RBP15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 WTAPQ15007 396 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 CTR9Q6PD62 1173 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 NFXL1Q6ZNB6 911 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 SDR42E1Q8WUS8 393 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 COA1Q9GZY4 146 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 TMX4Q9H1E5 349 aaPredicted RBP15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 GRPEL1Q9HAV7 217 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 DCP1AQ9NPI6 582 aaPredicted RBP15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 ORC3Q9UBD5 711 aaPredicted RBP15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 LAMB1P07942 1786 aa15.28■□□□□ 0.04
DEPDC1B-206ENST00000512452 GOLGA8AA7E2F4 631 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 FDPSP14324 419 aaKnown RBP15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 COL9A1P20849 921 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 CCDC183Q5T5S1 534 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 RTKN2Q8IZC4 609 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 C8orf76Q96K31 380 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 ZNF396Q96N95 335 aaPredicted RBP15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 UBAC1Q9BSL1 405 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 ADARB2Q9NS39 739 aaKnown RBP15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 AATFQ9NY61 560 aaKnown RBP eCLIP15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 TMEM63CQ9P1W3 806 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 POLLQ9UGP5 575 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 TACC3Q9Y6A5 838 aa15.27■□□□□ 0.04
DEPDC1B-206ENST00000512452 MROH7-TTC4A0A0A0MT08 1334 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 TCHHQ07283 1943 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 MINDY4BA8MYZ0 360 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 FOXD4L6Q3SYB3 417 aaPredicted RBP15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 LRSAM1Q6UWE0 723 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 FOXD4L3Q6VB84 417 aaPredicted RBP15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 BRAPQ7Z569 592 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 FERMT3Q86UX7 667 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 REM2Q8IYK8 340 aaPredicted RBP15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 FBXO18Q8NFZ0 1043 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 WASF1Q92558 559 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 GDPD2Q9HCC8 539 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 PGAP2Q9UHJ9 254 aa15.26■□□□□ 0.03
DEPDC1B-206ENST00000512452 ROBO3Q96MS0 1386 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 USP17L21D6R901 530 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 C6orf229H3BNL8 230 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 CALM1P0DP23 149 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 CALM2P0DP24 149 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 CALM3P0DP25 149 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 IFNAR1P17181 557 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 PDE4BQ07343 736 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 SEC23AQ15436 765 aa15.25■□□□□ 0.03
DEPDC1B-206ENST00000512452 CCDC178Q5BJE1 867 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms