RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SAP30BPQ9UHR5 308 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-229ENST00000512418 NDUFB9Q9Y6M9 179 aa17.92■□□□□ 0.46
CCHCR1-229ENST00000512418 C19orf81C9J6K1 198 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 GDF11O95390 407 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 INHAP05111 366 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 ELNP15502 786 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 USP5P45974 858 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 JAG1P78504 1218 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 RHPN1Q8TCX5 695 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 UNC93B1Q9H1C4 597 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 ANTXR1Q9H6X2 564 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 ZBTB21Q9ULJ3 1066 aa17.91■□□□□ 0.46
CCHCR1-229ENST00000512418 MYH1P12882 1939 aa17.9■□□□□ 0.46
CCHCR1-229ENST00000512418 USP17L10C9JJH3 530 aa17.9■□□□□ 0.46
CCHCR1-229ENST00000512418 IRX3P78415 501 aaPredicted RBP17.9■□□□□ 0.46
CCHCR1-229ENST00000512418 UBE2Q1Q7Z7E8 422 aa17.9■□□□□ 0.46
CCHCR1-229ENST00000512418 U2AF1L4Q8WU68 220 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-229ENST00000512418 IL1RAPL2Q9NP60 686 aa17.9■□□□□ 0.46
CCHCR1-229ENST00000512418 DOCK3Q8IZD9 2030 aa17.89■□□□□ 0.46
CCHCR1-229ENST00000512418 HOXA7P31268 230 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 TTF1Q15361 905 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 SHROOM1Q2M3G4 852 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 RPAP2Q8IXW5 612 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 CLASRPQ8N2M8 674 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 EHD4Q9H223 541 aa17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 MORF4L1Q9UBU8 362 aa17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 SERPINB13Q9UIV8 391 aa17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 TAOK2Q9UL54 1235 aa17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 DDX19BQ9UMR2 479 aa17.89■□□□□ 0.45
CCHCR1-229ENST00000512418 HMMRO75330 724 aa17.88■□□□□ 0.45
CCHCR1-229ENST00000512418 SGPL1O95470 568 aa17.88■□□□□ 0.45
CCHCR1-229ENST00000512418 CAPN2P17655 700 aa17.88■□□□□ 0.45
CCHCR1-229ENST00000512418 KIF1BPQ96EK5 621 aa17.88■□□□□ 0.45
CCHCR1-229ENST00000512418 HTATIP2Q9BUP3 242 aa17.88■□□□□ 0.45
CCHCR1-229ENST00000512418 DDX60LQ5H9U9 1706 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 FARP2O94887 1054 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 GH2P01242 217 aa17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 HERVK_113P62684 666 aa17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 TATDN1Q6P1N9 297 aa17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 TTC6Q86TZ1 520 aa17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 PAK6Q9NQU5 681 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 CEP290O15078 2479 aa17.87■□□□□ 0.45
CCHCR1-229ENST00000512418 H0YGN5 161 aa17.86■□□□□ 0.45
CCHCR1-229ENST00000512418 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCHCR1-229ENST00000512418 GTF3C2Q8WUA4 911 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-229ENST00000512418 DPF3Q92784 378 aa17.86■□□□□ 0.45
CCHCR1-229ENST00000512418 P2RX7Q99572 595 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-229ENST00000512418 MAGEB6P1A0A0J9YX57 407 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 APBB1O00213 710 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 HMGCRP04035 888 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 SLC9C2Q5TAH2 1124 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 USP17L2Q6R6M4 530 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 SIRT2Q8IXJ6 389 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 GPRC5AQ8NFJ5 357 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 DEFB118Q96PH6 123 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 EMILIN3Q9NT22 766 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 GJD2Q9UKL4 321 aa17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 COLQQ9Y215 455 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-229ENST00000512418 NAV1Q8NEY1 1877 aa17.84■□□□□ 0.45
CCHCR1-229ENST00000512418 RAB11FIP3O75154 756 aa17.84■□□□□ 0.45
CCHCR1-229ENST00000512418 PDE6AP16499 860 aa17.84■□□□□ 0.45
CCHCR1-229ENST00000512418 CERKLQ49MI3 558 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-229ENST00000512418 C12orf42Q96LP6 360 aa17.84■□□□□ 0.45
CCHCR1-229ENST00000512418 FEZ1Q99689 392 aa17.84■□□□□ 0.45
CCHCR1-229ENST00000512418 TXNRD2Q9NNW7 524 aa17.84■□□□□ 0.45
CCHCR1-229ENST00000512418 GOLIM4O00461 696 aa17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 TFRCP02786 760 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 RAB3GAP1Q15042 981 aa17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 ABCB5Q2M3G0 1257 aa17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 SOCS4Q8WXH5 440 aa17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 CRNKL1Q9BZJ0 848 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 PLXNB2O15031 1838 aa17.83■□□□□ 0.44
CCHCR1-229ENST00000512418 ZNF532Q9HCE3 1301 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 POLR3DP05423 398 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 MAPK4P31152 587 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 SHMT1P34896 483 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 PLCD1P51178 756 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 USP14P54578 494 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 ERVK-9P63128 1117 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 ERVK-24P63145 666 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 ZYXQ15942 572 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 NUDT12Q9BQG2 462 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 KIAA1683Q9H0B3 1180 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 CRISPLD2Q9H0B8 497 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 CABP5Q9NP86 173 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 RBPJLQ9UBG7 517 aa17.82■□□□□ 0.44
CCHCR1-229ENST00000512418 RPTORQ8N122 1335 aa17.81■□□□□ 0.44
CCHCR1-229ENST00000512418 TCRBV5S4A2TA0A5A2 114 aa17.81■□□□□ 0.44
CCHCR1-229ENST00000512418 PEX10O60683 326 aa17.81■□□□□ 0.44
CCHCR1-229ENST00000512418 FXR1P51114 621 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCHCR1-229ENST00000512418 PDE3AQ14432 1141 aa17.81■□□□□ 0.44
CCHCR1-229ENST00000512418 TRIB2Q92519 343 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms