RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 WBP1LQ9NX94 342 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
HTT-209ENST00000512068 LIMD1Q9UGP4 676 aa9.54□□□□□ -0.88
HTT-209ENST00000512068 NAP1L2Q9ULW6 460 aaPredicted RBP9.54□□□□□ -0.88
HTT-209ENST00000512068 CPA1P15085 419 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 NDUFV2P19404 249 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 MCM5P33992 734 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 USP5P45974 858 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 GTF2IP78347 998 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 NUCB2P80303 420 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 R3HDM1Q15032 1099 aaKnown RBP9.53□□□□□ -0.88
HTT-209ENST00000512068 RTKN2Q8IZC4 609 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 KRT23Q9C075 422 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 ALDH8A1Q9H2A2 487 aaPredicted RBP9.53□□□□□ -0.88
HTT-209ENST00000512068 AATFQ9NY61 560 aaKnown RBP eCLIP9.53□□□□□ -0.88
HTT-209ENST00000512068 SUGT1Q9Y2Z0 365 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 KIF13BQ9NQT8 1826 aa9.53□□□□□ -0.88
HTT-209ENST00000512068 ERICH2A1L162 156 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 APLP1P51693 650 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 TGFB2P61812 414 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 SART3Q15020 963 aaKnown RBP9.52□□□□□ -0.89
HTT-209ENST00000512068 TTLL5Q6EMB2 1281 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 MFSD6Q6ZSS7 791 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 Q6ZUG5 572 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 NYAP1Q6ZVC0 841 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 PODNQ7Z5L7 613 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 PDGFDQ9GZP0 370 aaPredicted RBP9.52□□□□□ -0.89
HTT-209ENST00000512068 SMC3Q9UQE7 1217 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 LAMB1P07942 1786 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 MROH7-TTC4A0A0A0MT08 1334 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 FAM205AQ6ZU69 1335 aa9.52□□□□□ -0.89
HTT-209ENST00000512068 NAV1Q8NEY1 1877 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 BAZ2AQ9UIF9 1905 aaKnown RBP9.51□□□□□ -0.89
HTT-209ENST00000512068 GSG1L2A8MUP6 293 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 PPIP5K2O43314 1243 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 PRC1O43663 620 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 C21orf2O43822 256 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 DPEP1P16444 411 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 DYNLL1P63167 89 aaKnown RBP9.51□□□□□ -0.89
HTT-209ENST00000512068 CUL4AQ13619 759 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 OLFM4Q6UX06 510 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 SLC51AQ86UW1 340 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 CCDC83Q8IWF9 413 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 SDR42E1Q8WUS8 393 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 GBP4Q96PP9 640 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 ATP8A2Q9NTI2 1148 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 PIM2Q9P1W9 311 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 ARPP21Q9UBL0 812 aaPredicted RBP9.51□□□□□ -0.89
HTT-209ENST00000512068 KIF3AQ9Y496 699 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 WDR19Q8NEZ3 1342 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
HTT-209ENST00000512068 A0A0G2JLW4 131 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 GOLGA6L22H0YM25 854 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 PRKAB2O43741 272 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 ECE2O60344 883 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 FDX1P10109 184 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 PCP11498 1178 aaKnown RBP9.5□□□□□ -0.89
HTT-209ENST00000512068 BTDP43251 543 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 PPARAQ07869 468 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 DALRD3Q5D0E6 543 aaKnown RBP9.5□□□□□ -0.89
HTT-209ENST00000512068 RRP12Q5JTH9 1297 aaKnown RBP9.5□□□□□ -0.89
HTT-209ENST00000512068 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 NFXL1Q6ZNB6 911 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 STOX1Q6ZVD7 989 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 ADGRA1Q86SQ6 560 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 BRF1Q92994 677 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 RIOK1Q9BRS2 568 aaKnown RBP9.5□□□□□ -0.89
HTT-209ENST00000512068 RTFDC1Q9BY42 306 aaPredicted RBP9.5□□□□□ -0.89
HTT-209ENST00000512068 DBNDD1Q9H9R9 158 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 EPB41L4AQ9HCS5 686 aaPredicted RBP9.5□□□□□ -0.89
HTT-209ENST00000512068 TAF6LQ9Y6J9 622 aa9.5□□□□□ -0.89
HTT-209ENST00000512068 USP17L3A6NCW0 530 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 USP17L4A6NCW7 530 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 F8W031 263 aaPredicted RBP9.49□□□□□ -0.89
HTT-209ENST00000512068 FOXP2O15409 715 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 DHX16O60231 1041 aaKnown RBP9.49□□□□□ -0.89
HTT-209ENST00000512068 PDIA4P13667 645 aaKnown RBP9.49□□□□□ -0.89
HTT-209ENST00000512068 PTMSP20962 102 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 PDE4BQ07343 736 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 KIAA2012Q0VF49 1180 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 STK3Q13188 491 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 TOB2Q14106 344 aaPredicted RBP9.49□□□□□ -0.89
HTT-209ENST00000512068 AOC3Q16853 763 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 MORN1Q5T089 497 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 PRPF38BQ5VTL8 546 aaKnown RBP9.49□□□□□ -0.89
HTT-209ENST00000512068 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 USP17L1Q7RTZ2 530 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 SPNS2Q8IVW8 549 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 TEX11Q8IYF3 940 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 ESR2Q92731 530 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 HLA-CQ95604 372 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 TEKT1Q969V4 418 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms