RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 SIPA1L1O43166 1804 aa20.29■□□□□ 0.84
SMN2-210ENST00000511812 RNF113AO15541 343 aaKnown RBP20.28■□□□□ 0.84
SMN2-210ENST00000511812 PRKAB2O43741 272 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 CHGBP05060 677 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 HMGCS2P54868 508 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 PABPC4Q13310 644 aaKnown RBP eCLIP20.28■□□□□ 0.84
SMN2-210ENST00000511812 TATDN1Q6P1N9 297 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 APPBP2Q92624 585 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 FSD1Q9BTV5 496 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 WDR18Q9BV38 432 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 PUS7LQ9H0K6 701 aaKnown RBP20.28■□□□□ 0.84
SMN2-210ENST00000511812 TMOD4Q9NZQ9 345 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 PNMA3Q9UL41 463 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 AGTPBP1Q9UPW5 1226 aa20.28■□□□□ 0.84
SMN2-210ENST00000511812 GH2P01242 217 aa20.27■□□□□ 0.84
SMN2-210ENST00000511812 CYP2C8P10632 490 aa20.27■□□□□ 0.84
SMN2-210ENST00000511812 ABCB5Q2M3G0 1257 aa20.27■□□□□ 0.84
SMN2-210ENST00000511812 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.84
SMN2-210ENST00000511812 C17orf99Q6UX52 265 aa20.27■□□□□ 0.84
SMN2-210ENST00000511812 SMCR8Q8TEV9 937 aaPredicted RBP20.27■□□□□ 0.84
SMN2-210ENST00000511812 HPS5Q9UPZ3 1129 aa20.27■□□□□ 0.84
SMN2-210ENST00000511812 MYH7P12883 1935 aa20.27■□□□□ 0.84
SMN2-210ENST00000511812 ATAD5Q96QE3 1844 aa20.27■□□□□ 0.84
SMN2-210ENST00000511812 NAV1Q8NEY1 1877 aa20.26■□□□□ 0.83
SMN2-210ENST00000511812 BACE1P56817 501 aa20.26■□□□□ 0.83
SMN2-210ENST00000511812 MTMR2Q13614 643 aa20.26■□□□□ 0.83
SMN2-210ENST00000511812 C19orf81C9J6K1 198 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 OSBPP22059 807 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 JAG1P78504 1218 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 LACTBP83111 547 aaPredicted RBP20.25■□□□□ 0.83
SMN2-210ENST00000511812 RAB3GAP1Q15042 981 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 SH3D19Q5HYK7 790 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 SMC5Q8IY18 1101 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 SWAP70Q9UH65 585 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 TAOK2Q9UL54 1235 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 PHIPQ8WWQ0 1821 aa20.25■□□□□ 0.83
SMN2-210ENST00000511812 USP17L12C9JPN9 530 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 USP17L21D6R901 530 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 MPHOSPH10O00566 681 aaKnown RBP20.24■□□□□ 0.83
SMN2-210ENST00000511812 CYP2D6P10635 497 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 SHMT1P34896 483 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 PDE1AP54750 535 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 GABPAQ06546 454 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 SHROOM1Q2M3G4 852 aaPredicted RBP20.24■□□□□ 0.83
SMN2-210ENST00000511812 TREML2Q5T2D2 321 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 STRBPQ96SI9 672 aaKnown RBP20.24■□□□□ 0.83
SMN2-210ENST00000511812 FEZ1Q99689 392 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 PTPN22Q9Y2R2 807 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 SALL3Q9BXA9 1300 aa20.24■□□□□ 0.83
SMN2-210ENST00000511812 ECM2O94769 699 aaPredicted RBP20.23■□□□□ 0.83
SMN2-210ENST00000511812 GNRH1P01148 92 aa20.23■□□□□ 0.83
SMN2-210ENST00000511812 IGHDP01880 384 aa20.23■□□□□ 0.83
SMN2-210ENST00000511812 GNAT2P19087 354 aa20.23■□□□□ 0.83
SMN2-210ENST00000511812 OSBP2Q969R2 916 aa20.23■□□□□ 0.83
SMN2-210ENST00000511812 STAP2Q9UGK3 403 aa20.23■□□□□ 0.83
SMN2-210ENST00000511812 ADGRA2Q96PE1 1338 aa20.23■□□□□ 0.83
SMN2-210ENST00000511812 PTPRFP10586 1907 aa20.22■□□□□ 0.83
SMN2-210ENST00000511812 GPAA1O43292 621 aa20.22■□□□□ 0.83
SMN2-210ENST00000511812 APPP05067 770 aa20.22■□□□□ 0.83
SMN2-210ENST00000511812 HOXD10P28358 340 aa20.22■□□□□ 0.83
SMN2-210ENST00000511812 IRX6P78412 446 aaPredicted RBP20.22■□□□□ 0.83
SMN2-210ENST00000511812 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
SMN2-210ENST00000511812 USP17L2Q6R6M4 530 aa20.22■□□□□ 0.83
SMN2-210ENST00000511812 EVI5LQ96CN4 794 aa20.22■□□□□ 0.83
SMN2-210ENST00000511812 DYNLL2Q96FJ2 89 aa20.22■□□□□ 0.83
SMN2-210ENST00000511812 ARPP21Q9UBL0 812 aaPredicted RBP20.22■□□□□ 0.83
SMN2-210ENST00000511812 DDX60LQ5H9U9 1706 aaKnown RBP20.22■□□□□ 0.83
SMN2-210ENST00000511812 FMNL1O95466 1100 aaPredicted RBP20.21■□□□□ 0.83
SMN2-210ENST00000511812 BCRP11274 1271 aa20.21■□□□□ 0.83
SMN2-210ENST00000511812 PSMC4P43686 418 aa20.21■□□□□ 0.83
SMN2-210ENST00000511812 USP14P54578 494 aa20.21■□□□□ 0.83
SMN2-210ENST00000511812 IRX3P78415 501 aaPredicted RBP20.21■□□□□ 0.83
SMN2-210ENST00000511812 GIMAP6Q6P9H5 292 aa20.21■□□□□ 0.83
SMN2-210ENST00000511812 CHD1LQ86WJ1 897 aa20.21■□□□□ 0.83
SMN2-210ENST00000511812 ARHGAP39Q9C0H5 1083 aa20.21■□□□□ 0.83
SMN2-210ENST00000511812 CYP2D7A0A087X1C5 515 aa20.2■□□□□ 0.82
SMN2-210ENST00000511812 M0R2C6 588 aa20.2■□□□□ 0.82
SMN2-210ENST00000511812 FCGRTP55899 365 aa20.2■□□□□ 0.82
SMN2-210ENST00000511812 NUCB1Q02818 461 aa20.2■□□□□ 0.82
SMN2-210ENST00000511812 EVX2Q03828 476 aa20.2■□□□□ 0.82
SMN2-210ENST00000511812 CTR9Q6PD62 1173 aa20.2■□□□□ 0.82
SMN2-210ENST00000511812 SLC44A5Q8NCS7 719 aa20.2■□□□□ 0.82
SMN2-210ENST00000511812 GSG1L2A8MUP6 293 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 GCLCP48506 637 aaPredicted RBP20.19■□□□□ 0.82
SMN2-210ENST00000511812 TDO2P48775 406 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 CDK8P49336 464 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 PRMT2P55345 433 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 CAP1Q01518 475 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 TMEM179Q6ZVK1 233 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 CCDC17Q96LX7 622 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 NACAP1Q9BZK3 213 aa20.19■□□□□ 0.82
SMN2-210ENST00000511812 ASCC2Q9H1I8 757 aaPredicted RBP20.19■□□□□ 0.82
SMN2-210ENST00000511812 MINDY4BA8MYZ0 360 aa20.18■□□□□ 0.82
SMN2-210ENST00000511812 HOXA7P31268 230 aaPredicted RBP20.18■□□□□ 0.82
SMN2-210ENST00000511812 SEPT2Q15019 361 aa20.18■□□□□ 0.82
SMN2-210ENST00000511812 ZYXQ15942 572 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms