RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 SCARA3Q6AZY7 606 aa10.93□□□□□ -0.66
LINC01088-207ENST00000511241 CLTCL1P53675 1640 aa10.93□□□□□ -0.66
LINC01088-207ENST00000511241 NRXN3Q9Y4C0 1643 aa10.92□□□□□ -0.66
LINC01088-207ENST00000511241 POU4F3Q15319 338 aa10.92□□□□□ -0.66
LINC01088-207ENST00000511241 HP1BP3Q5SSJ5 553 aaPredicted RBP10.92□□□□□ -0.66
LINC01088-207ENST00000511241 IGF2-ASQ6U949 168 aa10.92□□□□□ -0.66
LINC01088-207ENST00000511241 AGMOQ6ZNB7 445 aa10.92□□□□□ -0.66
LINC01088-207ENST00000511241 ALYREFQ86V81 257 aaKnown RBP10.92□□□□□ -0.66
LINC01088-207ENST00000511241 TMEM74Q96NL1 305 aa10.92□□□□□ -0.66
LINC01088-207ENST00000511241 CORO1BQ9BR76 489 aa10.92□□□□□ -0.66
LINC01088-207ENST00000511241 NRSN2Q9GZP1 204 aa10.92□□□□□ -0.66
LINC01088-207ENST00000511241 SPHKAPQ2M3C7 1700 aa10.92□□□□□ -0.66
LINC01088-207ENST00000511241 ERCC5P28715 1186 aaPredicted RBP10.91□□□□□ -0.66
LINC01088-207ENST00000511241 HNRNPUQ00839 825 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC01088-207ENST00000511241 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
LINC01088-207ENST00000511241 FOXD4L6Q3SYB3 417 aaPredicted RBP10.91□□□□□ -0.66
LINC01088-207ENST00000511241 C9orf131Q5VYM1 1079 aa10.91□□□□□ -0.66
LINC01088-207ENST00000511241 FOXD4L3Q6VB84 417 aaPredicted RBP10.91□□□□□ -0.66
LINC01088-207ENST00000511241 USP48Q86UV5 1035 aa10.91□□□□□ -0.66
LINC01088-207ENST00000511241 KBTBD4Q9NVX7 518 aa10.91□□□□□ -0.66
LINC01088-207ENST00000511241 GSTP1P09211 210 aaKnown RBP10.9□□□□□ -0.66
LINC01088-207ENST00000511241 SPATA31C1P0DKV0 1188 aa10.9□□□□□ -0.66
LINC01088-207ENST00000511241 GBP2P32456 591 aaPredicted RBP10.9□□□□□ -0.66
LINC01088-207ENST00000511241 PDZD3Q86UT5 571 aa10.9□□□□□ -0.66
LINC01088-207ENST00000511241 PHC3Q8NDX5 983 aa10.9□□□□□ -0.66
LINC01088-207ENST00000511241 TGIF2Q9GZN2 237 aa10.9□□□□□ -0.66
LINC01088-207ENST00000511241 C19orf44Q9H6X5 657 aa10.9□□□□□ -0.66
LINC01088-207ENST00000511241 CBX8Q9HC52 389 aa10.9□□□□□ -0.66
LINC01088-207ENST00000511241 COPRSQ9NQ92 184 aa10.9□□□□□ -0.66
LINC01088-207ENST00000511241 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
LINC01088-207ENST00000511241 DIP2AQ14689 1571 aa10.9□□□□□ -0.67
LINC01088-207ENST00000511241 PIK3R4Q99570 1358 aa10.9□□□□□ -0.67
LINC01088-207ENST00000511241 TRPM2O94759 1503 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 NEXMIFQ5QGS0 1516 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 LMNB1P20700 586 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 MAOBP27338 520 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 NLRP12P59046 1061 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 ZNF252P-AS1Q0IIN9 211 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 LLGL2Q6P1M3 1020 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 ZNF654Q8IZM8 581 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 STK35Q8TDR2 534 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 KRT82Q9NSB4 513 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 HFM1A2PYH4 1435 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 SETBP1Q9Y6X0 1596 aa10.89□□□□□ -0.67
LINC01088-207ENST00000511241 FAM229AH3BQW9 127 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 ADAM11O75078 769 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 ATF3P18847 181 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 LMNB2Q03252 620 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 DUOXA2Q1HG44 320 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 BRINP3Q76B58 766 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 DDX17Q92841 729 aaKnown RBP10.88□□□□□ -0.67
LINC01088-207ENST00000511241 USP26Q9BXU7 913 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 MRPL18Q9H0U6 180 aaKnown RBP10.88□□□□□ -0.67
LINC01088-207ENST00000511241 KCNK4Q9NYG8 393 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.88□□□□□ -0.67
LINC01088-207ENST00000511241 STK17AQ9UEE5 414 aa10.88□□□□□ -0.67
LINC01088-207ENST00000511241 PHLPP1O60346 1717 aa10.87□□□□□ -0.67
LINC01088-207ENST00000511241 NCOA3Q9Y6Q9 1424 aa10.87□□□□□ -0.67
LINC01088-207ENST00000511241 LOC100289279A0A1B0GTE1 492 aa10.87□□□□□ -0.67
LINC01088-207ENST00000511241 DDX3YO15523 660 aaKnown RBP10.87□□□□□ -0.67
LINC01088-207ENST00000511241 RAD51AP2Q09MP3 1159 aa10.87□□□□□ -0.67
LINC01088-207ENST00000511241 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
LINC01088-207ENST00000511241 CCDC84Q86UT8 332 aaPredicted RBP10.87□□□□□ -0.67
LINC01088-207ENST00000511241 RHOVQ96L33 236 aa10.87□□□□□ -0.67
LINC01088-207ENST00000511241 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.87□□□□□ -0.67
LINC01088-207ENST00000511241 LRP6O75581 1613 aa10.87□□□□□ -0.67
LINC01088-207ENST00000511241 COL16A1Q07092 1604 aaPredicted RBP10.87□□□□□ -0.67
LINC01088-207ENST00000511241 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
LINC01088-207ENST00000511241 MINDY4BA8MYZ0 360 aa10.86□□□□□ -0.67
LINC01088-207ENST00000511241 RNF225M0QZC1 329 aaPredicted RBP10.86□□□□□ -0.67
LINC01088-207ENST00000511241 TRIM37O94972 964 aa10.86□□□□□ -0.67
LINC01088-207ENST00000511241 ZNF394Q53GI3 561 aa10.86□□□□□ -0.67
LINC01088-207ENST00000511241 KCNB2Q92953 911 aa10.86□□□□□ -0.67
LINC01088-207ENST00000511241 NACC1Q96RE7 527 aa10.86□□□□□ -0.67
LINC01088-207ENST00000511241 TLR6Q9Y2C9 796 aa10.86□□□□□ -0.67
LINC01088-207ENST00000511241 JCADQ9P266 1359 aa10.86□□□□□ -0.67
LINC01088-207ENST00000511241 TFE3P19532 575 aaPredicted RBP10.85□□□□□ -0.67
LINC01088-207ENST00000511241 COL8A1P27658 744 aa10.85□□□□□ -0.67
LINC01088-207ENST00000511241 EIF4A3P38919 411 aaKnown RBP10.85□□□□□ -0.67
LINC01088-207ENST00000511241 RACK1P63244 317 aaKnown RBP10.85□□□□□ -0.67
LINC01088-207ENST00000511241 CAMK2GQ13555 558 aaPredicted RBP10.85□□□□□ -0.67
LINC01088-207ENST00000511241 EXOSC6Q5RKV6 272 aaKnown RBP10.85□□□□□ -0.67
LINC01088-207ENST00000511241 TRIM42Q8IWZ5 723 aa10.85□□□□□ -0.67
LINC01088-207ENST00000511241 TMEM130Q8N3G9 435 aa10.85□□□□□ -0.67
LINC01088-207ENST00000511241 GRIN3AQ8TCU5 1115 aa10.85□□□□□ -0.67
LINC01088-207ENST00000511241 MIR1-1HGQ9H1L0 117 aa10.85□□□□□ -0.67
LINC01088-207ENST00000511241 KCNQ5Q9NR82 932 aa10.85□□□□□ -0.67
LINC01088-207ENST00000511241 CACNA2D2Q9NY47 1150 aa10.85□□□□□ -0.67
LINC01088-207ENST00000511241 MST1RQ04912 1400 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 MEGF11A6BM72 1044 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 C9orf172C9J069 976 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 PF4P02776 101 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 RASIP1Q5U651 963 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 MAP1SQ66K74 1059 aaPredicted RBP10.84□□□□□ -0.67
LINC01088-207ENST00000511241 LENG1Q96BZ8 264 aaPredicted RBP10.84□□□□□ -0.67
LINC01088-207ENST00000511241 CCSER2Q9H7U1 834 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 PCDHGB7Q9Y5F8 929 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
LINC01088-207ENST00000511241 APBA3O96018 575 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms