RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
DDX41-212ENST00000511040 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 USP17L12C9JPN9 530 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 USP17L21D6R901 530 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 GH2P01242 217 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 PDE4AP27815 886 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 SHMT1P34896 483 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 DGKZQ13574 1117 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 ZMYM1Q5SVZ6 1142 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 GPAT2Q6NUI2 795 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
DDX41-212ENST00000511040 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
DDX41-212ENST00000511040 GSG1L2A8MUP6 293 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 PDHXO00330 501 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 FKTNO75072 461 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 APPP05067 770 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 ASNSP08243 561 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 GABPAQ06546 454 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 CERKLQ49MI3 558 aaPredicted RBP16.77■□□□□ 0.28
DDX41-212ENST00000511040 TATDN1Q6P1N9 297 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 CTR9Q6PD62 1173 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 ANKRD23Q86SG2 305 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 ZFYVE28Q9HCC9 887 aa16.77■□□□□ 0.28
DDX41-212ENST00000511040 ABCB5Q2M3G0 1257 aa16.76■□□□□ 0.27
DDX41-212ENST00000511040 C12orf60Q5U649 245 aa16.76■□□□□ 0.27
DDX41-212ENST00000511040 FASTKD5Q7L8L6 764 aaKnown RBP16.76■□□□□ 0.27
DDX41-212ENST00000511040 STK11IPQ8N1F8 1099 aa16.76■□□□□ 0.27
DDX41-212ENST00000511040 PTPRFP10586 1907 aa16.75■□□□□ 0.27
DDX41-212ENST00000511040 HMGCS2P54868 508 aa16.75■□□□□ 0.27
DDX41-212ENST00000511040 MTMR2Q13614 643 aa16.75■□□□□ 0.27
DDX41-212ENST00000511040 RAB3GAP1Q15042 981 aa16.75■□□□□ 0.27
DDX41-212ENST00000511040 AMOTL1Q8IY63 956 aa16.75■□□□□ 0.27
DDX41-212ENST00000511040 FAM227BQ96M60 508 aa16.75■□□□□ 0.27
DDX41-212ENST00000511040 OSBPL3Q9H4L5 887 aa16.75■□□□□ 0.27
DDX41-212ENST00000511040 AS3MTQ9HBK9 375 aa16.75■□□□□ 0.27
DDX41-212ENST00000511040 EPB41L4AQ9HCS5 686 aaPredicted RBP16.75■□□□□ 0.27
DDX41-212ENST00000511040 MINDY4BA8MYZ0 360 aa16.74■□□□□ 0.27
DDX41-212ENST00000511040 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
DDX41-212ENST00000511040 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
DDX41-212ENST00000511040 CYP2C8P10632 490 aa16.74■□□□□ 0.27
DDX41-212ENST00000511040 GNAT2P19087 354 aa16.74■□□□□ 0.27
DDX41-212ENST00000511040 TDO2P48775 406 aa16.74■□□□□ 0.27
DDX41-212ENST00000511040 NOM1Q5C9Z4 860 aaKnown RBP16.74■□□□□ 0.27
DDX41-212ENST00000511040 TREML2Q5T2D2 321 aa16.74■□□□□ 0.27
DDX41-212ENST00000511040 WDR18Q9BV38 432 aa16.74■□□□□ 0.27
DDX41-212ENST00000511040 MCOLN1Q9GZU1 580 aa16.74■□□□□ 0.27
DDX41-212ENST00000511040 ZCCHC17Q9NP64 241 aaKnown RBP16.74■□□□□ 0.27
DDX41-212ENST00000511040 CPA4Q9UI42 421 aa16.74■□□□□ 0.27
DDX41-212ENST00000511040 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 PATL2C9JE40 543 aaKnown RBP16.73■□□□□ 0.27
DDX41-212ENST00000511040 CAPN15O75808 1086 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 GUCY1A2P33402 732 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 CDK8P49336 464 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 NMIQ13287 307 aaPredicted RBP16.73■□□□□ 0.27
DDX41-212ENST00000511040 SEPT2Q15019 361 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 CTU1Q7Z7A3 348 aaKnown RBP16.73■□□□□ 0.27
DDX41-212ENST00000511040 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 TBC1D2Q9BYX2 928 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 CABP5Q9NP86 173 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 GINM1Q9NU53 330 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 ARPP21Q9UBL0 812 aaPredicted RBP16.73■□□□□ 0.27
DDX41-212ENST00000511040 SWAP70Q9UH65 585 aa16.73■□□□□ 0.27
DDX41-212ENST00000511040 TLR2O60603 784 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 AKR1B1P15121 316 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 BACE1P56817 501 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 CAP1Q01518 475 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 SP3Q02447 781 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 ZYXQ15942 572 aaKnown RBP16.72■□□□□ 0.27
DDX41-212ENST00000511040 GIMAP6Q6P9H5 292 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 IFNL3Q8IZI9 196 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 ACER1Q8TDN7 264 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 PARK7Q99497 189 aaKnown RBP16.72■□□□□ 0.27
DDX41-212ENST00000511040 FEZ1Q99689 392 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 AGTPBP1Q9UPW5 1226 aa16.72■□□□□ 0.27
DDX41-212ENST00000511040 FOXP2O15409 715 aa16.71■□□□□ 0.27
DDX41-212ENST00000511040 SDSP20132 328 aa16.71■□□□□ 0.27
DDX41-212ENST00000511040 SBK1Q52WX2 424 aa16.71■□□□□ 0.27
DDX41-212ENST00000511040 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
DDX41-212ENST00000511040 CLEC10AQ8IUN9 316 aa16.71■□□□□ 0.27
DDX41-212ENST00000511040 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
DDX41-212ENST00000511040 HELLSQ9NRZ9 838 aa16.71■□□□□ 0.27
DDX41-212ENST00000511040 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
DDX41-212ENST00000511040 MYH8P13535 1937 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 LOC285556D6RIA3 1793 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 MCMDC2Q4G0Z9 681 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 SH3D19Q5HYK7 790 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 SKAP1Q86WV1 359 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 PROCA1Q8NCQ7 364 aaPredicted RBP16.7■□□□□ 0.26
DDX41-212ENST00000511040 ERO1AQ96HE7 468 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 NAPBQ9H115 298 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 TRIM17Q9Y577 477 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 ADGRA2Q96PE1 1338 aa16.7■□□□□ 0.26
DDX41-212ENST00000511040 C19orf81C9J6K1 198 aa16.69■□□□□ 0.26
DDX41-212ENST00000511040 GSPT1P15170 499 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms