RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 ATP1A3P13637 1013 aa16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 CT47A1Q5JQC4 288 aaPredicted RBP16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 IQCA1Q86XH1 822 aa16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 VSTM4Q8IW00 320 aa16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 ERO1AQ96HE7 468 aa16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
AP003555.1-202ENST00000511013 MYH2Q9UKX2 1941 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 A0A1B0GUL6 1792 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 KDM4FA0A1W2PPD8 638 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 POLR2DO15514 142 aaKnown RBP16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 TOP1P11387 765 aaKnown RBP16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 GYG1P46976 350 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 TMED8Q6PL24 325 aaPredicted RBP16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 FCHSD1Q86WN1 690 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 SDR42E1Q8WUS8 393 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 ARID3AQ99856 593 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 FANCLQ9NW38 375 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 SERTAD1Q9UHV2 236 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 MAN1B1Q9UKM7 699 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 PCDHB6Q9Y5E3 794 aa16.3■□□□□ 0.2
AP003555.1-202ENST00000511013 NRAPQ86VF7 1730 aa16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 FGRP09769 529 aa16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 KRT2P35908 639 aa16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 SARSP49591 514 aaKnown RBP16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 NR5A1Q13285 461 aa16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 ADGRA1Q86SQ6 560 aa16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 ENOX1Q8TC92 643 aaKnown RBP16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 CABP5Q9NP86 173 aa16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 AATFQ9NY61 560 aaKnown RBP eCLIP16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 ZNF831Q5JPB2 1677 aa16.29■□□□□ 0.2
AP003555.1-202ENST00000511013 CACNA1SQ13698 1873 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 PDS5AQ29RF7 1337 aaKnown RBP16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 DDAH1O94760 285 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 SLU7O95391 586 aaKnown RBP16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 MORC3Q14149 939 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 ENAHQ8N8S7 591 aaPredicted RBP16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 MINPP1Q9UNW1 487 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 SPATA31A5Q5VU36 1347 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 SPATA31A7Q8IWB4 1347 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 SPECC1Q5M775 1068 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 DPF2Q92785 391 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 FERMT2Q96AC1 680 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 PHF20Q9BVI0 1012 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 DUOX1Q9NRD9 1551 aa16.28■□□□□ 0.2
AP003555.1-202ENST00000511013 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 BAZ2AQ9UIF9 1905 aaKnown RBP16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 ZSCAN12O43309 604 aa16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 CDK11BP21127 795 aaKnown RBP16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 BMP6P22004 513 aa16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 ERCC5P28715 1186 aaPredicted RBP16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 PDE4BQ07343 736 aa16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 OXER1Q8TDS5 423 aa16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 CSRNP2Q9H175 543 aa16.27■□□□□ 0.2
AP003555.1-202ENST00000511013 FOXN1O15353 648 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 ACTN4O43707 911 aaKnown RBP16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 ORC4O43929 436 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 ADAMTS2O95450 1211 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 DYNLL1P63167 89 aaKnown RBP16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 GRIN1Q05586 938 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 FUT2Q10981 343 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 PKN1Q16512 942 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 NUTM2AQ8IVF1 878 aaPredicted RBP16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 SPATA20Q8TB22 786 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 CRNKL1Q9BZJ0 848 aaKnown RBP16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 L2HGDHQ9H9P8 463 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 OGFRQ9NZT2 677 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 ZNF215Q9UL58 517 aaPredicted RBP16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 ATP2B1P20020 1258 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 PLCD1P51178 756 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 HOMER1Q86YM7 354 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 ZNF397Q8NF99 534 aaPredicted RBP16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 ANKRD2Q9GZV1 360 aa16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 V9GY48 417 aaPredicted RBP16.26■□□□□ 0.19
AP003555.1-202ENST00000511013 SCN7AQ01118 1682 aa16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 ZNF18P17022 549 aa16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 NT5C2P49902 561 aa16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 ETF1P62495 437 aaKnown RBP16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 TBX2Q13207 712 aaPredicted RBP16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 CTR9Q6PD62 1173 aa16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 BCL11BQ9C0K0 894 aaPredicted RBP16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 ZMYND15Q9H091 742 aa16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 VPS54Q9P1Q0 977 aa16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 NFE2L3Q9Y4A8 694 aa16.25■□□□□ 0.19
AP003555.1-202ENST00000511013 PHLPP2Q6ZVD8 1323 aa16.24■□□□□ 0.19
AP003555.1-202ENST00000511013 COL1A1P02452 1464 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms