RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 TDRD3Q9H7E2 651 aaKnown RBP10.67□□□□□ -0.7
PDPN-209ENST00000510906 MAP10Q9P2G4 905 aa10.67□□□□□ -0.7
PDPN-209ENST00000510906 ZNF70Q9UC06 446 aaPredicted RBP10.67□□□□□ -0.7
PDPN-209ENST00000510906 CUL9Q8IWT3 2517 aa10.67□□□□□ -0.7
PDPN-209ENST00000510906 SZT2Q5T011 3432 aa10.67□□□□□ -0.7
PDPN-209ENST00000510906 COL1A1P02452 1464 aaPredicted RBP10.67□□□□□ -0.7
PDPN-209ENST00000510906 SSC5DA1L4H1 1573 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 GNAI2P04899 355 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 ADORA1P30542 326 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 RASA3Q14644 834 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 NBPF12Q5TAG4 269 aaPredicted RBP10.66□□□□□ -0.7
PDPN-209ENST00000510906 ARMC9Q7Z3E5 817 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 CDAN1Q8IWY9 1227 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 UCN2Q96RP3 112 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 CSRNP1Q96S65 589 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 ANGEL1Q9UNK9 670 aaKnown RBP10.66□□□□□ -0.7
PDPN-209ENST00000510906 PPP2R3BQ9Y5P8 575 aa10.66□□□□□ -0.7
PDPN-209ENST00000510906 PNMA6EA0A0J9YXQ4 647 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 POTEMA6NI47 508 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 TCP10L2B9ZVM9 353 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 RLBP1P12271 317 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 PHKA1P46020 1223 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 HDLBPQ00341 1268 aaKnown RBP10.65□□□□□ -0.7
PDPN-209ENST00000510906 TFCP2Q12800 502 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 NR1H3Q13133 447 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 LDLRAD1Q5T700 205 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 TEKT1Q969V4 418 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 RNF186Q9NXI6 227 aa10.65□□□□□ -0.7
PDPN-209ENST00000510906 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.65□□□□□ -0.7
PDPN-209ENST00000510906 CCDC85CA6NKD9 419 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 TRPA1O75762 1119 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 FBXO45P0C2W1 286 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 CCNYL3P0C7X3 344 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
PDPN-209ENST00000510906 CACNB3P54284 484 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 COPS2P61201 443 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 TIMM10P62072 90 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 SUPT20HL1Q3ZLR7 823 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 FTSJ3Q8IY81 847 aaKnown RBP10.64□□□□□ -0.71
PDPN-209ENST00000510906 WDR66Q8TBY9 1149 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
PDPN-209ENST00000510906 CLMNQ96JQ2 1002 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 PPP1R12CQ9BZL4 782 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 EVA1BQ9NVM1 165 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 SUGT1Q9Y2Z0 365 aa10.64□□□□□ -0.71
PDPN-209ENST00000510906 MAST3O60307 1309 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 A0A1B0GUL7 405 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
PDPN-209ENST00000510906 PRDX5P30044 214 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 TNFAIP1Q13829 316 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 MAP3K11Q16584 847 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 CCDC102BQ68D86 513 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 APOBEC3HQ6NTF7 200 aaKnown RBP10.63□□□□□ -0.71
PDPN-209ENST00000510906 ITPRIPQ8IWB1 547 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 ZDHHC15Q96MV8 337 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 TEPSINQ96N21 525 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 MRIQ9BWK5 157 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 TMEM39BQ9GZU3 492 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 GNL3LQ9NVN8 582 aaKnown RBP10.63□□□□□ -0.71
PDPN-209ENST00000510906 SAGE1Q9NXZ1 904 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 ARAP2Q8WZ64 1704 aa10.63□□□□□ -0.71
PDPN-209ENST00000510906 ZBBXA8MT70 800 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 USP2O75604 605 aaPredicted RBP10.62□□□□□ -0.71
PDPN-209ENST00000510906 ADH1BP00325 375 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 RASGRF1Q13972 1273 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 SPRYD7Q5W111 196 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 HHIPL2Q6UWX4 724 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 PBXIP1Q96AQ6 731 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 XAGE2Q96GT9 111 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 NUDT12Q9BQG2 462 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 TRAIPQ9BWF2 469 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 DENND2AQ9ULE3 1009 aa10.62□□□□□ -0.71
PDPN-209ENST00000510906 ZBTB7BO15156 539 aaPredicted RBP10.61□□□□□ -0.71
PDPN-209ENST00000510906 TLL1O43897 1013 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 LDHBP07195 334 aaKnown RBP10.61□□□□□ -0.71
PDPN-209ENST00000510906 TNNI2P48788 182 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 ATP8B2P98198 1209 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 G3BP1Q13283 466 aaKnown RBP eCLIP10.61□□□□□ -0.71
PDPN-209ENST00000510906 RETREG2Q8NC44 543 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 PANK1Q8TE04 598 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 SLC10A4Q96EP9 437 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 NEUROD6Q96NK8 337 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 MTRQ99707 1265 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 TMOD2Q9NZR1 351 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 AKAP2Q9Y2D5 859 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 DAGLAQ9Y4D2 1042 aa10.61□□□□□ -0.71
PDPN-209ENST00000510906 SALL1Q9NSC2 1324 aa10.6□□□□□ -0.71
PDPN-209ENST00000510906 PALM3A6NDB9 673 aaPredicted RBP10.6□□□□□ -0.71
PDPN-209ENST00000510906 TBC1D8O95759 1140 aa10.6□□□□□ -0.71
PDPN-209ENST00000510906 IREB2P48200 963 aaKnown RBP10.6□□□□□ -0.71
PDPN-209ENST00000510906 TM4SF4P48230 202 aa10.6□□□□□ -0.71
PDPN-209ENST00000510906 KCNH2Q12809 1159 aa10.6□□□□□ -0.71
PDPN-209ENST00000510906 SEMA3FQ13275 785 aa10.6□□□□□ -0.71
PDPN-209ENST00000510906 MVPQ14764 893 aaKnown RBP10.6□□□□□ -0.71
PDPN-209ENST00000510906 CDC42EP5Q6NZY7 148 aa10.6□□□□□ -0.71
PDPN-209ENST00000510906 SSH3Q8TE77 659 aa10.6□□□□□ -0.71
PDPN-209ENST00000510906 GPKOWQ92917 476 aaPredicted RBP eCLIP10.6□□□□□ -0.71
PDPN-209ENST00000510906 WNK4Q96J92 1243 aa10.6□□□□□ -0.71
PDPN-209ENST00000510906 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms