RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SRGNP10124 158 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 PDE4CQ08493 712 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 ASPRV1Q53RT3 343 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 KRT79Q5XKE5 535 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 USP17L2Q6R6M4 530 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 TMEM179Q6ZVK1 233 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 FASTKD5Q7L8L6 764 aaKnown RBP5.86□□□□□ -1.47
PHF3-210ENST00000509876 STAP2Q9UGK3 403 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 CCPG1Q9ULG6 757 aa5.86□□□□□ -1.47
PHF3-210ENST00000509876 AKAP12Q02952 1782 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 E7EWF7 191 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 STX6O43752 255 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 CFBP00751 764 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 GPATCH4Q5T3I0 446 aaKnown RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 KRT25Q7Z3Z0 450 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 FAM160B2Q86V87 743 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 PIH1D3Q9NQM4 214 aaKnown RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 ADD3Q9UEY8 706 aaKnown RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 HSPD1P10809 573 aaKnown RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 RXRAP19793 462 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 ZNF157P51786 506 aaPredicted RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 SP4Q02446 784 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 SH3RF3Q8TEJ3 882 aaPredicted RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 EDC3Q96F86 508 aaKnown RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 MYOZ2Q9NPC6 264 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 PRKAG2Q9UGJ0 569 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 ANKRD26Q9UPS8 1709 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 M0R2C6 588 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 EPHX2P34913 555 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 PDIA6Q15084 440 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 RABL6Q3YEC7 729 aaPredicted RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 CDC37L1Q7L3B6 337 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 USP37Q86T82 979 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 FBXO11Q86XK2 927 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 LCORLQ8N3X6 602 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 NECAB1Q8N987 351 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 COA7Q96BR5 231 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 FAM84BQ96KN1 310 aaPredicted RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 FRMPD2Q68DX3 1309 aaPredicted RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 MCAMP43121 646 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 ZBTB21Q9ULJ3 1066 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 FAM208AQ9UK61 1670 aaKnown RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 DISP2A7MBM2 1401 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 CCDC192P0DO97 292 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 NAP1L1P55209 391 aaKnown RBP5.85□□□□□ -1.47
PHF3-210ENST00000509876 AP5M1Q9H0R1 490 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 NUP62CLQ9H1M0 184 aa5.85□□□□□ -1.47
PHF3-210ENST00000509876 CELF2O95319 508 aaKnown RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 VEGFAP15692 232 aaPredicted RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 ARID4AP29374 1257 aaPredicted RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 RASSF7Q02833 373 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 GIMAP6Q6P9H5 292 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 TXLNBQ8N3L3 684 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 ZNHIT6Q9NWK9 470 aaKnown RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 PKD2L1Q9P0L9 805 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 CNPY2Q9Y2B0 182 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 V9GY48 417 aaPredicted RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 UBN2Q6ZU65 1347 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 CBFA2T2O43439 604 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 YY1P25490 414 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 COPB2P35606 906 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 STAT6P42226 847 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 AK2P54819 239 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 CETN1Q12798 172 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 PNMA1Q8ND90 353 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 CNNM3Q8NE01 707 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 RMND1Q9NWS8 449 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 GGA3Q9NZ52 723 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 HERC5Q9UII4 1024 aaKnown RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 A0A0D9SFI3 127 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 SMTNL1A8MU46 457 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 BMP3P12645 472 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 ZFYVE27Q5T4F4 411 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 ANGEL2Q5VTE6 544 aaKnown RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 HHIPL2Q6UWX4 724 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 SKAP1Q86WV1 359 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 TMX3Q96JJ7 454 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 LLPHQ9BRT6 129 aaKnown RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 USP26Q9BXU7 913 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 MLXIPQ9HAP2 919 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 HOXC10Q9NYD6 342 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 SERPINA10Q9UK55 444 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 ZHX2Q9Y6X8 837 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 STAT2P52630 851 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 HAUS3Q68CZ6 603 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 BRAPQ7Z569 592 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 PDILTQ8N807 584 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 GTF3C2Q8WUA4 911 aaPredicted RBP5.84□□□□□ -1.47
PHF3-210ENST00000509876 TBC1D32Q96NH3 1257 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 TSPY26PQ9H489 355 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 RRAGCQ9HB90 399 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 RIPOR2Q9Y4F9 1068 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 TNKSO95271 1327 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 DNM2P50570 870 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 NONOQ15233 471 aaKnown RBP eCLIP5.84□□□□□ -1.47
PHF3-210ENST00000509876 CAMKK2Q96RR4 588 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 NBPF3Q9H094 633 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 EXOC1Q9NV70 894 aa5.84□□□□□ -1.47
PHF3-210ENST00000509876 PPFIA3O75145 1194 aa5.84□□□□□ -1.48
PHF3-210ENST00000509876 KCNG4Q8TDN1 519 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms