RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 B4E1Z4 1266 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 KDM4AO75164 1064 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 MCM5P33992 734 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 SHMT1P34896 483 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 MAP3K10Q02779 954 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 CERKLQ49MI3 558 aaPredicted RBP16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 DHX32Q7L7V1 743 aaKnown RBP16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 CDCA5Q96FF9 252 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 KIF2CQ99661 725 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
CYSTM1-204ENST00000509789 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 TSPY2A6NKD2 308 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 RASA1P20936 1047 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 TATDN1Q6P1N9 297 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 ZNF341Q9BYN7 854 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 ZSWIM5Q9P217 1185 aa16.34■□□□□ 0.21
CYSTM1-204ENST00000509789 LAMB1P07942 1786 aa16.33■□□□□ 0.21
CYSTM1-204ENST00000509789 PRC1O43663 620 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 PPP1R12BO60237 982 aaPredicted RBP16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 NEK4P51957 841 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 TFAP4Q01664 338 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 EXOSC10Q01780 885 aaKnown RBP16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 DLK2Q6UY11 383 aa16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 MB21D2Q8IYB1 491 aaPredicted RBP16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
CYSTM1-204ENST00000509789 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 CPA1P15085 419 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 FGD1P98174 961 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 SART3Q15020 963 aaKnown RBP16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 CYB5R4Q7L1T6 521 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 IQCA1Q86XH1 822 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 PDRG1Q9NUG6 133 aa16.32■□□□□ 0.2
CYSTM1-204ENST00000509789 ERICH2A1L162 156 aa16.31■□□□□ 0.2
CYSTM1-204ENST00000509789 KIF3CO14782 793 aa16.31■□□□□ 0.2
CYSTM1-204ENST00000509789 AKR1B1P15121 316 aa16.31■□□□□ 0.2
CYSTM1-204ENST00000509789 ABCB5Q2M3G0 1257 aa16.31■□□□□ 0.2
CYSTM1-204ENST00000509789 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
CYSTM1-204ENST00000509789 PHF20L1A8MW92 1017 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 TRAF5O00463 557 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 IFIT3O14879 490 aaKnown RBP16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 ST18O60284 1047 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 CAP2P40123 477 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 ANTXR2P58335 489 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 PRKG1Q13976 671 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 NKX2-3Q8TAU0 364 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 ZSCAN10Q96SZ4 725 aaPredicted RBP16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 MTA3Q9BTC8 594 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 GINM1Q9NU53 330 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
CYSTM1-204ENST00000509789 CTNND1O60716 968 aaKnown RBP16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 GDF11O95390 407 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 IREB2P48200 963 aaKnown RBP16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 COL9A3Q14050 684 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 RRP1BQ14684 758 aaKnown RBP16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 TMEM179Q6ZVK1 233 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 ARMC9Q7Z3E5 817 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 ZNF784Q8NCA9 323 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 TCEANC2Q96MN5 208 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 WRNIP1Q96S55 665 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 ALDH8A1Q9H2A2 487 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 ZNF408Q9H9D4 720 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 SIPA1L1O43166 1804 aa16.29■□□□□ 0.2
CYSTM1-204ENST00000509789 ITGBL1O95965 494 aaPredicted RBP16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 GH2P01242 217 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 ASNSP08243 561 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 MAP3K9P80192 1104 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 Q6ZUG5 572 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 TMTC2Q8N394 836 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 KLRG1Q96E93 195 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 LRRC2Q9BYS8 371 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 ANGEL1Q9UNK9 670 aaKnown RBP16.28■□□□□ 0.2
CYSTM1-204ENST00000509789 SSC5DA1L4H1 1573 aa16.27■□□□□ 0.2
CYSTM1-204ENST00000509789 NMT2O60551 498 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms