RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 BCORL1Q5H9F3 1711 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 CROCC2H7BZ55 1655 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 CLTCL1P53675 1640 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 KIF27Q86VH2 1401 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 LMOD1P29536 600 aaPredicted RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 ITGAEP38570 1179 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 RRP1P56182 461 aaKnown RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 FTSJ3Q8IY81 847 aaKnown RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 FBXO15Q8NCQ5 510 aaPredicted RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 DIRC2Q96SL1 478 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 RNF17Q9BXT8 1623 aaKnown RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 GRIN2BQ13224 1484 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 ATAD2BQ9ULI0 1458 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 CGNL1Q0VF96 1302 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 TMEM265A0A087WTH1 108 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 LEFTY1O75610 366 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 UBTFP17480 764 aaKnown RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 ITIH2P19823 946 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 POU4F3Q15319 338 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 CIAPIN1Q6FI81 312 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 XKR5Q6UX68 686 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 CENPQQ7L2Z9 268 aaPredicted RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.85□□□□□ -1.95
CAST-226ENST00000509529 CCDC94Q9BW85 323 aaPredicted RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 KCNK12Q9HB15 430 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 MKNK2Q9HBH9 465 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 DNMT1P26358 1616 aaKnown RBP2.85□□□□□ -1.95
CAST-226ENST00000509529 GRIN2AQ12879 1464 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 PARD3Q8TEW0 1356 aa2.85□□□□□ -1.95
CAST-226ENST00000509529 EREGO14944 169 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 ZSCAN20P17040 1043 aaPredicted RBP2.84□□□□□ -1.95
CAST-226ENST00000509529 ZP2Q05996 745 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 CCDC173Q0VFZ6 552 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 C8orf34Q49A92 452 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 DBX2Q6ZNG2 339 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 ABTB2Q8N961 1025 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 PDLIM2Q96JY6 352 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 TMEM51Q9NW97 253 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 PPP1R9AQ9ULJ8 1098 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 LRRIQ1Q96JM4 1722 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 USP19O94966 1318 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 PPRC1Q5VV67 1664 aaKnown RBP2.84□□□□□ -1.95
CAST-226ENST00000509529 A0A0G2JLL6 359 aaPredicted RBP2.84□□□□□ -1.95
CAST-226ENST00000509529 TULP2O00295 520 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 FOXD2O60548 495 aaPredicted RBP2.84□□□□□ -1.95
CAST-226ENST00000509529 CYP11A1P05108 521 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 RIPK4P57078 832 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 SKOR2Q2VWA4 1001 aaPredicted RBP2.84□□□□□ -1.95
CAST-226ENST00000509529 ATG14Q6ZNE5 492 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 ARHGAP27Q6ZUM4 889 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 KIRREL1Q96J84 757 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 TRIM56Q9BRZ2 755 aaKnown RBP2.84□□□□□ -1.95
CAST-226ENST00000509529 GGNBP2Q9H3C7 697 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 NSUN3Q9H649 340 aaKnown RBP2.84□□□□□ -1.95
CAST-226ENST00000509529 LATS2Q9NRM7 1088 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 ADCY10Q96PN6 1610 aa2.84□□□□□ -1.95
CAST-226ENST00000509529 AOC2O75106 756 aa2.84□□□□□ -1.96
CAST-226ENST00000509529 XRCC6P12956 609 aaKnown RBP eCLIP2.84□□□□□ -1.96
CAST-226ENST00000509529 HSP90B1P14625 803 aaKnown RBP2.84□□□□□ -1.96
CAST-226ENST00000509529 AFMP43652 599 aa2.84□□□□□ -1.96
CAST-226ENST00000509529 HNRNPUQ00839 825 aaKnown RBP eCLIP2.84□□□□□ -1.96
CAST-226ENST00000509529 DDX10Q13206 875 aaKnown RBP2.84□□□□□ -1.96
CAST-226ENST00000509529 IKZF1Q13422 519 aa2.84□□□□□ -1.96
CAST-226ENST00000509529 CNGB1Q14028 1251 aaPredicted RBP2.84□□□□□ -1.96
CAST-226ENST00000509529 ZNF423Q2M1K9 1284 aa2.84□□□□□ -1.96
CAST-226ENST00000509529 HP1BP3Q5SSJ5 553 aaPredicted RBP2.84□□□□□ -1.96
CAST-226ENST00000509529 PEAR1Q5VY43 1037 aaPredicted RBP2.84□□□□□ -1.96
CAST-226ENST00000509529 GGNQ86UU5 652 aa2.84□□□□□ -1.96
CAST-226ENST00000509529 WDR18Q9BV38 432 aa2.84□□□□□ -1.96
CAST-226ENST00000509529 TNKS2Q9H2K2 1166 aa2.84□□□□□ -1.96
CAST-226ENST00000509529 GEMIN8Q9NWZ8 242 aaKnown RBP2.84□□□□□ -1.96
CAST-226ENST00000509529 NAP1L2Q9ULW6 460 aaPredicted RBP2.84□□□□□ -1.96
CAST-226ENST00000509529 TONSLQ96HA7 1378 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 EIF4G3O43432 1585 aaKnown RBP2.83□□□□□ -1.96
CAST-226ENST00000509529 CANXP27824 592 aaKnown RBP2.83□□□□□ -1.96
CAST-226ENST00000509529 GABPB1Q06547 395 aaPredicted RBP2.83□□□□□ -1.96
CAST-226ENST00000509529 PCDH1Q08174 1060 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 SWI5Q1ZZU3 235 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 DUSP23Q9BVJ7 150 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 EIF2AK4Q9P2K8 1649 aaKnown RBP2.83□□□□□ -1.96
CAST-226ENST00000509529 KANK1Q14678 1352 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 GPRASP1Q5JY77 1395 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 KIF15Q9NS87 1388 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 PRDM15P57071 1507 aaPredicted RBP2.83□□□□□ -1.96
CAST-226ENST00000509529 PLB1Q6P1J6 1458 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 EIF4EBP3O60516 100 aaPredicted RBP2.83□□□□□ -1.96
CAST-226ENST00000509529 TMEM253P0C7T8 217 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 EDN3P14138 238 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 B4GALNT3Q6L9W6 998 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 ZSCAN30Q86W11 494 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 PNISRQ8TF01 805 aaKnown RBP2.83□□□□□ -1.96
CAST-226ENST00000509529 PMEPA1Q969W9 287 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 PARD6AQ9NPB6 346 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 NOVA2Q9UNW9 492 aaKnown RBP2.83□□□□□ -1.96
CAST-226ENST00000509529 USP32Q8NFA0 1604 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 ANKRD30BQ9BXX2 1392 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 FAM135AQ9P2D6 1515 aa2.83□□□□□ -1.96
CAST-226ENST00000509529 MAPK8IP3Q9UPT6 1336 aa2.82□□□□□ -1.96
CAST-226ENST00000509529 PBRM1Q86U86 1689 aa2.82□□□□□ -1.96
CAST-226ENST00000509529 SHANK2Q9UPX8 1470 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms