RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 MS4A4AQ96JQ5 239 aa13.56□□□□□ -0.24
SIL1-212ENST00000509400 COL6A3P12111 3177 aa13.56□□□□□ -0.24
SIL1-212ENST00000509400 A0A0C4DFX4 3053 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 MINDY4BA8MYZ0 360 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 RRP1BQ14684 758 aaKnown RBP13.55□□□□□ -0.24
SIL1-212ENST00000509400 ALX1Q15699 326 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 C12orf60Q5U649 245 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 GIMAP6Q6P9H5 292 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 STK11IPQ8N1F8 1099 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 ZNF333Q96JL9 665 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 ELP3Q9H9T3 547 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 PI4KBQ9UBF8 816 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 ATRNL1Q5VV63 1379 aa13.55□□□□□ -0.24
SIL1-212ENST00000509400 UNCXA6NJT0 531 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 IREB2P48200 963 aaKnown RBP13.54□□□□□ -0.24
SIL1-212ENST00000509400 TDO2P48775 406 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 MAP3K10Q02779 954 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 SBK1Q52WX2 424 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 FOXP4Q8IVH2 680 aaPredicted RBP13.54□□□□□ -0.24
SIL1-212ENST00000509400 SLC44A5Q8NCS7 719 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 BRI3BPQ8WY22 251 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 OPTNQ96CV9 577 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 LSG1Q9H089 658 aaKnown RBP13.54□□□□□ -0.24
SIL1-212ENST00000509400 NAPBQ9H115 298 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 DHX36Q9H2U1 1008 aaKnown RBP13.54□□□□□ -0.24
SIL1-212ENST00000509400 DNAJC18Q9H819 358 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 INCENPQ9NQS7 918 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 PTCH2Q9Y6C5 1203 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 RAD50Q92878 1312 aa13.54□□□□□ -0.24
SIL1-212ENST00000509400 RPAP1Q9BWH6 1393 aaPredicted RBP13.54□□□□□ -0.24
SIL1-212ENST00000509400 MAST2Q6P0Q8 1798 aa13.53□□□□□ -0.24
SIL1-212ENST00000509400 HLA-DOAP06340 250 aa13.53□□□□□ -0.24
SIL1-212ENST00000509400 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
SIL1-212ENST00000509400 GABPAQ06546 454 aa13.53□□□□□ -0.24
SIL1-212ENST00000509400 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.53□□□□□ -0.24
SIL1-212ENST00000509400 TTC6Q86TZ1 520 aa13.53□□□□□ -0.24
SIL1-212ENST00000509400 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
SIL1-212ENST00000509400 ANKRD13AQ8IZ07 590 aa13.53□□□□□ -0.24
SIL1-212ENST00000509400 DSCC1Q9BVC3 393 aa13.53□□□□□ -0.24
SIL1-212ENST00000509400 NACAP1Q9BZK3 213 aa13.53□□□□□ -0.24
SIL1-212ENST00000509400 COLQQ9Y215 455 aaPredicted RBP13.53□□□□□ -0.24
SIL1-212ENST00000509400 TRIOBPQ9H2D6 2365 aa13.53□□□□□ -0.24
SIL1-212ENST00000509400 LAMA3Q16787 3333 aa13.52□□□□□ -0.24
SIL1-212ENST00000509400 PHF20L1A8MW92 1017 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 TBC1D12O60347 775 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 INPP5BP32019 993 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 HAND2P61296 217 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 JAG1P78504 1218 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 CTDSPL2Q05D32 466 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 PPARAQ07869 468 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.25
SIL1-212ENST00000509400 OTUD7BQ6GQQ9 843 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 DDRGK1Q96HY6 314 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.52□□□□□ -0.251e-9■■■■■ 61.7
SIL1-212ENST00000509400 ZNF112Q9UJU3 913 aa13.52□□□□□ -0.25
SIL1-212ENST00000509400 MYCP01106 439 aaPredicted RBP13.51□□□□□ -0.25
SIL1-212ENST00000509400 CDK8P49336 464 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 DCAF15Q66K64 600 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 KIAA1211Q6ZU35 1233 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 FAM43AQ8N2R8 423 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 CRACR2BQ8N4Y2 399 aaPredicted RBP13.51□□□□□ -0.25
SIL1-212ENST00000509400 MAP4K1Q92918 833 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 ZKSCAN4Q969J2 545 aaPredicted RBP13.51□□□□□ -0.25
SIL1-212ENST00000509400 ZNF341Q9BYN7 854 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 ARHGAP39Q9C0H5 1083 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 ANO2Q9NQ90 1003 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 ARPP21Q9UBL0 812 aaPredicted RBP13.51□□□□□ -0.25
SIL1-212ENST00000509400 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
SIL1-212ENST00000509400 COL2A1P02458 1487 aaPredicted RBP13.5□□□□□ -0.25
SIL1-212ENST00000509400 SEC24BO95487 1268 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 SHMT1P34896 483 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 VGLL4Q14135 290 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.5□□□□□ -0.25
SIL1-212ENST00000509400 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 OTUD5Q96G74 571 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 WRNIP1Q96S55 665 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 EHD4Q9H223 541 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.5□□□□□ -0.25
SIL1-212ENST00000509400 HERC5Q9UII4 1024 aaKnown RBP13.5□□□□□ -0.25
SIL1-212ENST00000509400 RBM8AQ9Y5S9 174 aaKnown RBP13.5□□□□□ -0.25
SIL1-212ENST00000509400 TAF6LQ9Y6J9 622 aa13.5□□□□□ -0.25
SIL1-212ENST00000509400 CCL15-CCL14A0A0B4J2E2 113 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 H0YGN5 161 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 TAF1CQ15572 869 aaPredicted RBP13.49□□□□□ -0.25
SIL1-212ENST00000509400 CCL15Q16663 113 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 SLC9C1Q4G0N8 1177 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 C16orf86Q6ZW13 317 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 CCDC84Q86UT8 332 aaPredicted RBP13.49□□□□□ -0.25
SIL1-212ENST00000509400 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 AMOTL1Q8IY63 956 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 SH3TC2Q8TF17 1288 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 HOOK2Q96ED9 719 aa13.49□□□□□ -0.25
SIL1-212ENST00000509400 U3KPZ7 1027 aaPredicted RBP13.49□□□□□ -0.25
SIL1-212ENST00000509400 ZNF213O14771 459 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms