RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 NUCB1Q02818 461 aa19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 SH3D19Q5HYK7 790 aa19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 APPBP2Q92624 585 aa19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 ERO1AQ96HE7 468 aa19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 LNPKQ9C0E8 428 aa19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 SIPA1L1O43166 1804 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 FOCADQ5VW36 1801 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 USP17L12C9JPN9 530 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 USP17L21D6R901 530 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 SMIM22K7EJ46 135 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 CERKLQ49MI3 558 aaPredicted RBP19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 C12orf60Q5U649 245 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 GADL1Q6ZQY3 521 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 CHD1LQ86WJ1 897 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 CD99L2Q8TCZ2 262 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 AS3MTQ9HBK9 375 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 SLC45A1Q9Y2W3 748 aa19.42■□□□□ 0.7
PDLIM5-212ENST00000509333 MYH1P12882 1939 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 GSG1L2A8MUP6 293 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 GH2P01242 217 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 CYP2C8P10632 490 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 BACE1P56817 501 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 OTOP1Q7RTM1 612 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 CPA4Q9UI42 421 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 TRIM17Q9Y577 477 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 ADGRA2Q96PE1 1338 aa19.41■□□□□ 0.7
PDLIM5-212ENST00000509333 CYP2D7A0A087X1C5 515 aa19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 C19orf81C9J6K1 198 aa19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 LRRFIP1Q32MZ4 808 aaKnown RBP19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 TREML2Q5T2D2 321 aa19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 CTR9Q6PD62 1173 aa19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 PROCA1Q8NCQ7 364 aaPredicted RBP19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 DYNLL2Q96FJ2 89 aa19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 SEC62Q99442 399 aaKnown RBP19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 EFCC1Q9HA90 598 aa19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 TAOK2Q9UL54 1235 aa19.4■□□□□ 0.7
PDLIM5-212ENST00000509333 PHIPQ8WWQ0 1821 aa19.39■□□□□ 0.7
PDLIM5-212ENST00000509333 CCDC85CA6NKD9 419 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 PATL2C9JE40 543 aaKnown RBP19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 M0R2C6 588 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 BCRP11274 1271 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 GUCY1A2P33402 732 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 HMGCS2P54868 508 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 ABCB5Q2M3G0 1257 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 ZMYM1Q5SVZ6 1142 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 GIMAP6Q6P9H5 292 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 FBXO46Q6PJ61 603 aaPredicted RBP19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 PLEKHM2Q8IWE5 1019 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 EVI5LQ96CN4 794 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 AGTPBP1Q9UPW5 1226 aa19.39■□□□□ 0.69
PDLIM5-212ENST00000509333 USP17L10C9JJH3 530 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 GPAA1O43292 621 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 SBK1Q52WX2 424 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 PARK7Q99497 189 aaKnown RBP19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 FSD1Q9BTV5 496 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 OSBPL3Q9H4L5 887 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 CABP5Q9NP86 173 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 EMILIN3Q9NT22 766 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 HPS5Q9UPZ3 1129 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 PTPN22Q9Y2R2 807 aa19.38■□□□□ 0.69
PDLIM5-212ENST00000509333 DOCK1Q14185 1865 aa19.37■□□□□ 0.69
PDLIM5-212ENST00000509333 CDK8P49336 464 aa19.37■□□□□ 0.69
PDLIM5-212ENST00000509333 LACTBP83111 547 aaPredicted RBP19.37■□□□□ 0.69
PDLIM5-212ENST00000509333 ARHGEF6Q15052 776 aa19.37■□□□□ 0.69
PDLIM5-212ENST00000509333 SLC44A5Q8NCS7 719 aa19.37■□□□□ 0.69
PDLIM5-212ENST00000509333 DDRGK1Q96HY6 314 aa19.37■□□□□ 0.69
PDLIM5-212ENST00000509333 SWAP70Q9UH65 585 aa19.37■□□□□ 0.69
PDLIM5-212ENST00000509333 CTGFP29279 349 aa19.36■□□□□ 0.69
PDLIM5-212ENST00000509333 HOXA7P31268 230 aaPredicted RBP19.36■□□□□ 0.69
PDLIM5-212ENST00000509333 MTMR2Q13614 643 aa19.36■□□□□ 0.69
PDLIM5-212ENST00000509333 SEPT2Q15019 361 aa19.36■□□□□ 0.69
PDLIM5-212ENST00000509333 TICAM2Q86XR7 235 aa19.36■□□□□ 0.69
PDLIM5-212ENST00000509333 SIAH1Q8IUQ4 282 aa19.36■□□□□ 0.69
PDLIM5-212ENST00000509333 ACER1Q8TDN7 264 aa19.36■□□□□ 0.69
PDLIM5-212ENST00000509333 ARHGAP39Q9C0H5 1083 aa19.36■□□□□ 0.69
PDLIM5-212ENST00000509333 GNAT2P19087 354 aa19.35■□□□□ 0.69
PDLIM5-212ENST00000509333 RAB3GAP1Q15042 981 aa19.35■□□□□ 0.69
PDLIM5-212ENST00000509333 TMOD4Q9NZQ9 345 aa19.35■□□□□ 0.69
PDLIM5-212ENST00000509333 MYH7P12883 1935 aa19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 OSBPP22059 807 aa19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 PSMC4P43686 418 aa19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 PABPC4Q13310 644 aaKnown RBP eCLIP19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 KIF22Q14807 665 aa19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 C16orf86Q6ZW13 317 aa19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 IFNL3Q8IZI9 196 aa19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 CCDC17Q96LX7 622 aa19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 P2RX7Q99572 595 aaKnown RBP19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 ASCC2Q9H1I8 757 aaPredicted RBP19.34■□□□□ 0.69
PDLIM5-212ENST00000509333 GNRH1P01148 92 aa19.33■□□□□ 0.68
PDLIM5-212ENST00000509333 AMOTL1Q8IY63 956 aa19.33■□□□□ 0.68
PDLIM5-212ENST00000509333 KIAA1683Q9H0B3 1180 aa19.33■□□□□ 0.68
PDLIM5-212ENST00000509333 EPB41L4AQ9HCS5 686 aaPredicted RBP19.33■□□□□ 0.68
PDLIM5-212ENST00000509333 PTPRFP10586 1907 aa19.33■□□□□ 0.68
PDLIM5-212ENST00000509333 A0A1W2PRG0 241 aa19.32■□□□□ 0.68
PDLIM5-212ENST00000509333 MINDY4BA8MYZ0 360 aa19.32■□□□□ 0.68
PDLIM5-212ENST00000509333 MPHOSPH10O00566 681 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms