RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.3□□□□□ -0.92
GYPB-210ENST00000508841 ARMC10Q8N2F6 343 aa9.3□□□□□ -0.92
GYPB-210ENST00000508841 ZFP64Q9NPA5 681 aa9.3□□□□□ -0.92
GYPB-210ENST00000508841 CORINQ9Y5Q5 1042 aa9.3□□□□□ -0.92
GYPB-210ENST00000508841 BTBD11A6QL63 1104 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 RSPO4Q2I0M5 234 aaPredicted RBP9.29□□□□□ -0.92
GYPB-210ENST00000508841 SGO2Q562F6 1265 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 FBXW10Q5XX13 1052 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 CDPF1Q6NVV7 123 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 PAOXQ6QHF9 649 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 CLEC10AQ8IUN9 316 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 GIMAP7Q8NHV1 300 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 TMEM40Q8WWA1 233 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 SEMA6CQ9H3T2 930 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 PPT2Q9UMR5 302 aa9.29□□□□□ -0.92
GYPB-210ENST00000508841 FAM95CA0A1B0GW59 222 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 STK10O94804 968 aaKnown RBP9.28□□□□□ -0.92
GYPB-210ENST00000508841 LRIG2O94898 1065 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 GIPRP48546 466 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 TNNI3KQ59H18 835 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 SLFN12Q8IYM2 578 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 MFSD2AQ8NA29 543 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 FAM13CQ8NE31 585 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 FBLIM1Q8WUP2 373 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
GYPB-210ENST00000508841 TMEM87BQ96K49 555 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 TM9SF2Q99805 663 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 HIRIP3Q9BW71 556 aaPredicted RBP9.28□□□□□ -0.92
GYPB-210ENST00000508841 KCNF1Q9H3M0 494 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 DAGLAQ9Y4D2 1042 aa9.28□□□□□ -0.92
GYPB-210ENST00000508841 ARTNQ5T4W7 220 aa9.27□□□□□ -0.93
GYPB-210ENST00000508841 SOGA3Q5TF21 947 aa9.27□□□□□ -0.93
GYPB-210ENST00000508841 TAB3Q8N5C8 712 aaPredicted RBP9.27□□□□□ -0.93
GYPB-210ENST00000508841 TP53INP1Q96A56 240 aa9.27□□□□□ -0.93
GYPB-210ENST00000508841 SHDQ96IW2 340 aa9.27□□□□□ -0.93
GYPB-210ENST00000508841 FOXQ1Q9C009 403 aa9.27□□□□□ -0.93
GYPB-210ENST00000508841 TJP2Q9UDY2 1190 aa9.27□□□□□ -0.93
GYPB-210ENST00000508841 RAXQ9Y2V3 346 aa9.27□□□□□ -0.93
GYPB-210ENST00000508841 CST3P01034 146 aaPredicted RBP9.26□□□□□ -0.93
GYPB-210ENST00000508841 NFICP08651 508 aa9.26□□□□□ -0.93
GYPB-210ENST00000508841 CDCP2Q5VXM1 449 aa9.26□□□□□ -0.93
GYPB-210ENST00000508841 CCDC81Q6ZN84 652 aa9.26□□□□□ -0.93
GYPB-210ENST00000508841 BEND4Q6ZU67 534 aa9.26□□□□□ -0.93
GYPB-210ENST00000508841 NBPF11Q86T75 865 aa9.26□□□□□ -0.93
GYPB-210ENST00000508841 C19orf47Q8N9M1 422 aaKnown RBP9.26□□□□□ -0.93
GYPB-210ENST00000508841 FAM83CQ9BQN1 747 aa9.26□□□□□ -0.93
GYPB-210ENST00000508841 SLC12A7Q9Y666 1083 aa9.26□□□□□ -0.93
GYPB-210ENST00000508841 SLC22A31A6NKX4 558 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 GTF2F1P35269 517 aaKnown RBP eCLIP9.25□□□□□ -0.93
GYPB-210ENST00000508841 CCNFP41002 786 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 SLBPQ14493 270 aaKnown RBP eCLIP9.25□□□□□ -0.93
GYPB-210ENST00000508841 NKAPLQ5M9Q1 402 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 INTS3Q68E01 1043 aaKnown RBP9.25□□□□□ -0.93
GYPB-210ENST00000508841 NLRC3Q7RTR2 1065 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 KRTAP9-9Q9BYP9 154 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 KRTAP9-4Q9BYQ2 154 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 CNNM2Q9H8M5 875 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 FBRSQ9HAH7 460 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 USP35Q9P2H5 1018 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 KLHL3Q9UH77 587 aa9.25□□□□□ -0.93
GYPB-210ENST00000508841 NFKBIBQ15653 356 aa9.24□□□□□ -0.93
GYPB-210ENST00000508841 OVOS1Q6IE37 1185 aa9.24□□□□□ -0.93
GYPB-210ENST00000508841 ARMCX6Q7L4S7 300 aa9.24□□□□□ -0.93
GYPB-210ENST00000508841 LSRQ86X29 649 aaPredicted RBP9.24□□□□□ -0.93
GYPB-210ENST00000508841 CKAP2LQ8IYA6 745 aa9.24□□□□□ -0.93
GYPB-210ENST00000508841 ANAPC16Q96DE5 110 aa9.24□□□□□ -0.93
GYPB-210ENST00000508841 STOML1Q9UBI4 398 aa9.24□□□□□ -0.93
GYPB-210ENST00000508841 PRKAG3Q9UGI9 489 aa9.24□□□□□ -0.93
GYPB-210ENST00000508841 TNFRSF10CO14798 259 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 GSC2O15499 205 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 NME1P15531 152 aaKnown RBP9.23□□□□□ -0.93
GYPB-210ENST00000508841 RAG1P15918 1043 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 NBPF6Q5VWK0 638 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 PRR23CQ6ZRP0 262 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 CYB5D2Q8WUJ1 264 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 ATG4CQ96DT6 458 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 ZNF408Q9H9D4 720 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 TPSG1Q9NRR2 321 aa9.23□□□□□ -0.93
GYPB-210ENST00000508841 PPP1R1BQ9UD71 204 aaPredicted RBP9.23□□□□□ -0.93
GYPB-210ENST00000508841 R3HCC1Q9Y3T6 440 aaKnown RBP9.23□□□□□ -0.93
GYPB-210ENST00000508841 DYRK3O43781 588 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 H2AFB1P0C5Y9 115 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 H2AFB2P0C5Z0 115 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 GUCY2CP25092 1073 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 NKG7Q16617 165 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 PRAMEF13Q5VWM6 474 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 ZNF746Q6NUN9 644 aaPredicted RBP9.22□□□□□ -0.93
GYPB-210ENST00000508841 SEZ6L2Q6UXD5 910 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 PHACTR4Q8IZ21 702 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 CCDC74BQ96LY2 380 aa9.22□□□□□ -0.93
GYPB-210ENST00000508841 CHURC1-FNTBB4DL54 471 aa9.21□□□□□ -0.94
GYPB-210ENST00000508841 CASP7P55210 303 aa9.21□□□□□ -0.94
GYPB-210ENST00000508841 RBL2Q08999 1139 aa9.21□□□□□ -0.94
GYPB-210ENST00000508841 ARSHQ5FYA8 562 aa9.21□□□□□ -0.94
GYPB-210ENST00000508841 SLC51AQ86UW1 340 aa9.21□□□□□ -0.94
GYPB-210ENST00000508841 MRVI1Q9Y6F6 885 aa9.21□□□□□ -0.94
GYPB-210ENST00000508841 RGS13O14921 159 aa9.2□□□□□ -0.94
GYPB-210ENST00000508841 CHMP4BP1P59074 171 aa9.2□□□□□ -0.94
GYPB-210ENST00000508841 CYP27A1Q02318 531 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms