RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 GINM1Q9NU53 330 aa15.76■□□□□ 0.11
SH3TC1-215ENST00000508438 ZBTB21Q9ULJ3 1066 aa15.76■□□□□ 0.11
SH3TC1-215ENST00000508438 PLXNB2O15031 1838 aa15.75■□□□□ 0.11
SH3TC1-215ENST00000508438 DDX60LQ5H9U9 1706 aaKnown RBP15.75■□□□□ 0.11
SH3TC1-215ENST00000508438 HLA-DOAP06340 250 aa15.75■□□□□ 0.11
SH3TC1-215ENST00000508438 MS4A1P11836 297 aa15.75■□□□□ 0.11
SH3TC1-215ENST00000508438 HABP4Q5JVS0 413 aaKnown RBP15.75■□□□□ 0.11
SH3TC1-215ENST00000508438 UBE2Q1Q7Z7E8 422 aa15.75■□□□□ 0.11
SH3TC1-215ENST00000508438 COA7Q96BR5 231 aa15.75■□□□□ 0.11
SH3TC1-215ENST00000508438 TRIM34Q9BYJ4 488 aa15.75■□□□□ 0.11
SH3TC1-215ENST00000508438 CEP290O15078 2479 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 INHAP05111 366 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 HOXA7P31268 230 aaPredicted RBP15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 USP5P45974 858 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 MAP3K12Q12852 859 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 HSP90AB4PQ58FF6 505 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 CERS3Q8IU89 383 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 SIRT2Q8IXJ6 389 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 U2AF1L4Q8WU68 220 aaKnown RBP15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 COG6Q9Y2V7 657 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 NAV1Q8NEY1 1877 aa15.74■□□□□ 0.11
SH3TC1-215ENST00000508438 C19orf81C9J6K1 198 aa15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 USP17L10C9JJH3 530 aa15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 TMED8Q6PL24 325 aaPredicted RBP15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 RPAP2Q8IXW5 612 aaPredicted RBP15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 P2RX7Q99572 595 aaKnown RBP15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 RIOK1Q9BRS2 568 aaKnown RBP15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 ZBTB40Q9NUA8 1239 aa15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 TMOD4Q9NZQ9 345 aa15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 MORF4L1Q9UBU8 362 aa15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 TAOK2Q9UL54 1235 aa15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 DDX19BQ9UMR2 479 aa15.73■□□□□ 0.11
SH3TC1-215ENST00000508438 H0YGN5 161 aa15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 APBB1O00213 710 aa15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 SGPL1O95470 568 aa15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 GH2P01242 217 aa15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 IRX3P78415 501 aaPredicted RBP15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 TATDN1Q6P1N9 297 aa15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 KIF1BPQ96EK5 621 aa15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 EHD4Q9H223 541 aa15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 GJD2Q9UKL4 321 aa15.72■□□□□ 0.11
SH3TC1-215ENST00000508438 PEX10O60683 326 aa15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 HERVK_113P62684 666 aa15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 TTF1Q15361 905 aaPredicted RBP15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 CLASRPQ8N2M8 674 aaKnown RBP15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 TXNRD2Q9NNW7 524 aa15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 PAK6Q9NQU5 681 aaPredicted RBP15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 EMILIN3Q9NT22 766 aa15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 PCDH10Q9P2E7 1040 aa15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 SERPINB13Q9UIV8 391 aa15.71■□□□□ 0.11
SH3TC1-215ENST00000508438 MAGEB6P1A0A0J9YX57 407 aa15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 HMMRO75330 724 aa15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 FARP2O94887 1054 aaPredicted RBP15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 PDE6AP16499 860 aa15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 PLCD1P51178 756 aa15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 USP17L2Q6R6M4 530 aa15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 TTC6Q86TZ1 520 aa15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 DEFB118Q96PH6 123 aa15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 RBPJLQ9UBG7 517 aa15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 COLQQ9Y215 455 aaPredicted RBP15.7■□□□□ 0.1
SH3TC1-215ENST00000508438 TCRBV5S4A2TA0A5A2 114 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 GOLIM4O00461 696 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 IFIT2P09913 472 aaKnown RBP15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 SHMT1P34896 483 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 SLC9C2Q5TAH2 1124 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 POTEEQ6S8J3 1075 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 DPF3Q92784 378 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 C12orf42Q96LP6 360 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 DNAJC2Q99543 621 aaKnown RBP15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 CRISPLD2Q9H0B8 497 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
SH3TC1-215ENST00000508438 ZNF532Q9HCE3 1301 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 ALPK3Q96L96 1907 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 RAB11FIP3O75154 756 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 HMGCRP04035 888 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 EVX2Q03828 476 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 GABPAQ06546 454 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 TRIM32Q13049 653 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 Q3C1V9 767 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 GPRC5AQ8NFJ5 357 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 EDC3Q96F86 508 aaKnown RBP15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 HTATIP2Q9BUP3 242 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 MYH7P12883 1935 aa15.68■□□□□ 0.1
SH3TC1-215ENST00000508438 MYH8P13535 1937 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 BAZ2AQ9UIF9 1905 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 TFRCP02786 760 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 CAPN2P17655 700 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 GUCY1A2P33402 732 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 ERVK-9P63128 1117 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 ERVK-24P63145 666 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 RAB3GAP1Q15042 981 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 ZYXQ15942 572 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 ABCB5Q2M3G0 1257 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 LCORLQ8N3X6 602 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 ACER1Q8TDN7 264 aa15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 CRNKL1Q9BZJ0 848 aaKnown RBP15.67■□□□□ 0.1
SH3TC1-215ENST00000508438 BCL11AQ9H165 835 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms