RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 MAP3K12Q12852 859 aa17.53■□□□□ 0.4
NEDD4-207ENST00000508075 ASCC2Q9H1I8 757 aaPredicted RBP17.53■□□□□ 0.4
NEDD4-207ENST00000508075 ZNF532Q9HCE3 1301 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 MAGEB6P1A0A0J9YX57 407 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 TNPO2O14787 897 aaKnown RBP17.52■□□□□ 0.4
NEDD4-207ENST00000508075 GH2P01242 217 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 HLA-DOAP06340 250 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 FLT3LGP49771 235 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 PLCD1P51178 756 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 PRPF38BQ5VTL8 546 aaKnown RBP17.52■□□□□ 0.4
NEDD4-207ENST00000508075 LCORLQ8N3X6 602 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 SDR42E1Q8WUS8 393 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 SHISA4Q96DD7 197 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 RIOK1Q9BRS2 568 aaKnown RBP17.52■□□□□ 0.4
NEDD4-207ENST00000508075 MYH7P12883 1935 aa17.52■□□□□ 0.4
NEDD4-207ENST00000508075 PRKAB2O43741 272 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 HMMRO75330 724 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 CCL5P13501 91 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 HOXD10P28358 340 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 FOXP4Q8IVH2 680 aaPredicted RBP17.51■□□□□ 0.39
NEDD4-207ENST00000508075 UNC93B1Q9H1C4 597 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 ARMT1Q9H993 441 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 AS3MTQ9HBK9 375 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 PLXNB2O15031 1838 aa17.51■□□□□ 0.39
NEDD4-207ENST00000508075 PROCA1Q8NCQ7 364 aaPredicted RBP17.5■□□□□ 0.39
NEDD4-207ENST00000508075 P2RX7Q99572 595 aaKnown RBP17.5■□□□□ 0.39
NEDD4-207ENST00000508075 SLC45A1Q9Y2W3 748 aa17.5■□□□□ 0.39
NEDD4-207ENST00000508075 MYH8P13535 1937 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 TCRBV5S4A2TA0A5A2 114 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 ADCY3O60266 1144 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 GNRH1P01148 92 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 ASNSP08243 561 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 PRMT2P55345 433 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 BACE1P56817 501 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 RAB3GAP1Q15042 981 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 SH3D19Q5HYK7 790 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 METTL16Q86W50 562 aaKnown RBP17.49■□□□□ 0.39
NEDD4-207ENST00000508075 SLC44A5Q8NCS7 719 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 ACER1Q8TDN7 264 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 WDR18Q9BV38 432 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 TXNRD2Q9NNW7 524 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 EMILIN3Q9NT22 766 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 TMOD4Q9NZQ9 345 aa17.49■□□□□ 0.39
NEDD4-207ENST00000508075 BRCA2P51587 3418 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 CYP2D7A0A087X1C5 515 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 POLR3DP05423 398 aaPredicted RBP17.48■□□□□ 0.39
NEDD4-207ENST00000508075 IRX3P78415 501 aaPredicted RBP17.48■□□□□ 0.39
NEDD4-207ENST00000508075 TRIM32Q13049 653 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 POTEEQ6S8J3 1075 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 CLEC10AQ8IUN9 316 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 DYNLL2Q96FJ2 89 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 RNF208Q9H0X6 261 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 MCM9Q9NXL9 1143 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 PNMA3Q9UL41 463 aa17.48■□□□□ 0.39
NEDD4-207ENST00000508075 USP17L10C9JJH3 530 aa17.47■□□□□ 0.39
NEDD4-207ENST00000508075 MBD4O95243 580 aa17.47■□□□□ 0.39
NEDD4-207ENST00000508075 INHAP05111 366 aa17.47■□□□□ 0.39
NEDD4-207ENST00000508075 SHMT1P34896 483 aa17.47■□□□□ 0.39
NEDD4-207ENST00000508075 FEZ1Q99689 392 aa17.47■□□□□ 0.39
NEDD4-207ENST00000508075 PAGR1Q9BTK6 254 aa17.47■□□□□ 0.39
NEDD4-207ENST00000508075 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
NEDD4-207ENST00000508075 MKI67P46013 3256 aaKnown RBP17.46■□□□□ 0.39
NEDD4-207ENST00000508075 GUCY1A2P33402 732 aa17.46■□□□□ 0.39
NEDD4-207ENST00000508075 TTF1Q15361 905 aaPredicted RBP17.46■□□□□ 0.39
NEDD4-207ENST00000508075 FAM110CQ1W6H9 321 aa17.46■□□□□ 0.39
NEDD4-207ENST00000508075 Q3C1V9 767 aa17.46■□□□□ 0.39
NEDD4-207ENST00000508075 CERKLQ49MI3 558 aaPredicted RBP17.46■□□□□ 0.39
NEDD4-207ENST00000508075 TATDN1Q6P1N9 297 aa17.46■□□□□ 0.39
NEDD4-207ENST00000508075 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
NEDD4-207ENST00000508075 CRNKL1Q9BZJ0 848 aaKnown RBP17.46■□□□□ 0.39
NEDD4-207ENST00000508075 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
NEDD4-207ENST00000508075 ADD2P35612 726 aa17.45■□□□□ 0.38
NEDD4-207ENST00000508075 PDE3AQ14432 1141 aa17.45■□□□□ 0.38
NEDD4-207ENST00000508075 SEPT2Q15019 361 aa17.45■□□□□ 0.38
NEDD4-207ENST00000508075 ABCB5Q2M3G0 1257 aa17.45■□□□□ 0.38
NEDD4-207ENST00000508075 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
NEDD4-207ENST00000508075 STK11IPQ8N1F8 1099 aa17.45■□□□□ 0.38
NEDD4-207ENST00000508075 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.45■□□□□ 0.38
NEDD4-207ENST00000508075 COA7Q96BR5 231 aa17.45■□□□□ 0.38
NEDD4-207ENST00000508075 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
NEDD4-207ENST00000508075 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
NEDD4-207ENST00000508075 SLC34A2O95436 690 aa17.44■□□□□ 0.38
NEDD4-207ENST00000508075 ATP5JP18859 108 aa17.44■□□□□ 0.38
NEDD4-207ENST00000508075 HERVK_113P62684 666 aa17.44■□□□□ 0.38
NEDD4-207ENST00000508075 PABPC4Q13310 644 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEDD4-207ENST00000508075 SLAIN1Q8ND83 568 aa17.44■□□□□ 0.38
NEDD4-207ENST00000508075 HAUS7Q99871 368 aa17.44■□□□□ 0.38
NEDD4-207ENST00000508075 TBC1D2Q9BYX2 928 aa17.44■□□□□ 0.38
NEDD4-207ENST00000508075 DCP1AQ9NPI6 582 aaPredicted RBP17.44■□□□□ 0.38
NEDD4-207ENST00000508075 RBPJLQ9UBG7 517 aa17.44■□□□□ 0.38
NEDD4-207ENST00000508075 CYP2B6P20813 491 aa17.43■□□□□ 0.38
NEDD4-207ENST00000508075 GCLCP48506 637 aaPredicted RBP17.43■□□□□ 0.38
NEDD4-207ENST00000508075 UBXN2AP68543 259 aa17.43■□□□□ 0.38
NEDD4-207ENST00000508075 USP17L2Q6R6M4 530 aa17.43■□□□□ 0.38
NEDD4-207ENST00000508075 U2AF1L4Q8WU68 220 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms