RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
PTPN13-207ENST00000508063 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.47□□□□□ -0.25
PTPN13-207ENST00000508063 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
PTPN13-207ENST00000508063 LOC285556D6RIA3 1793 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 C19orf81C9J6K1 198 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 APBB1O00213 710 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 HMGCS2P54868 508 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 UBXN2AP68543 259 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 TREML2Q5T2D2 321 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 TTC6Q86TZ1 520 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 MIGA1Q8NAN2 632 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 SLAIN1Q8ND83 568 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.25
PTPN13-207ENST00000508063 MYH1P12882 1939 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 TNPO2O14787 897 aaKnown RBP13.45□□□□□ -0.26
PTPN13-207ENST00000508063 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 BACE1P56817 501 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 PRKCZQ05513 592 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 RRP1BQ14684 758 aaKnown RBP13.45□□□□□ -0.26
PTPN13-207ENST00000508063 FAM110CQ1W6H9 321 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 ANKRD13CQ8N6S4 541 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 NKX2-3Q8TAU0 364 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 COA7Q96BR5 231 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 BIN2Q9UBW5 565 aaPredicted RBP13.45□□□□□ -0.26
PTPN13-207ENST00000508063 NDUFB9Q9Y6M9 179 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 SIPA1L1O43166 1804 aa13.45□□□□□ -0.26
PTPN13-207ENST00000508063 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 USP17L10C9JJH3 530 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 MYCP01106 439 aaPredicted RBP13.44□□□□□ -0.26
PTPN13-207ENST00000508063 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPN13-207ENST00000508063 IRF5Q13568 498 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 MTMR2Q13614 643 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 SLC9C2Q5TAH2 1124 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 CRNKL1Q9BZJ0 848 aaKnown RBP13.44□□□□□ -0.26
PTPN13-207ENST00000508063 EHD4Q9H223 541 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 ZBTB21Q9ULJ3 1066 aa13.44□□□□□ -0.26
PTPN13-207ENST00000508063 KIAA0100Q14667 2235 aaKnown RBP13.44□□□□□ -0.26
PTPN13-207ENST00000508063 GOLIM4O00461 696 aa13.43□□□□□ -0.26
PTPN13-207ENST00000508063 GDF11O95390 407 aa13.43□□□□□ -0.26
PTPN13-207ENST00000508063 CAPN2P17655 700 aa13.43□□□□□ -0.26
PTPN13-207ENST00000508063 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-207ENST00000508063 POTEHQ6S545 545 aa13.43□□□□□ -0.26
PTPN13-207ENST00000508063 PXYLP1Q8TE99 480 aa13.43□□□□□ -0.26
PTPN13-207ENST00000508063 DNAJC2Q99543 621 aaKnown RBP13.43□□□□□ -0.26
PTPN13-207ENST00000508063 ASCC2Q9H1I8 757 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-207ENST00000508063 ADCY3O60266 1144 aa13.42□□□□□ -0.26
PTPN13-207ENST00000508063 POLR3DP05423 398 aaPredicted RBP13.42□□□□□ -0.26
PTPN13-207ENST00000508063 PDE6AP16499 860 aa13.42□□□□□ -0.26
PTPN13-207ENST00000508063 HOXA7P31268 230 aaPredicted RBP13.42□□□□□ -0.26
PTPN13-207ENST00000508063 FLT3LGP49771 235 aa13.42□□□□□ -0.26
PTPN13-207ENST00000508063 TATDN1Q6P1N9 297 aa13.42□□□□□ -0.26
PTPN13-207ENST00000508063 USP17L2Q6R6M4 530 aa13.42□□□□□ -0.26
PTPN13-207ENST00000508063 GTF3C2Q8WUA4 911 aaPredicted RBP13.42□□□□□ -0.26
PTPN13-207ENST00000508063 RIOK1Q9BRS2 568 aaKnown RBP13.42□□□□□ -0.26
PTPN13-207ENST00000508063 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPN13-207ENST00000508063 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
PTPN13-207ENST00000508063 CABP5Q9NP86 173 aa13.42□□□□□ -0.26
PTPN13-207ENST00000508063 GABRQQ9UN88 632 aa13.42□□□□□ -0.26
PTPN13-207ENST00000508063 SLC34A2O95436 690 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 GH2P01242 217 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 GJB1P08034 283 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 CCL5P13501 91 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 ATP5JP18859 108 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 MTFR1Q15390 333 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 CERKLQ49MI3 558 aaPredicted RBP13.41□□□□□ -0.26
PTPN13-207ENST00000508063 FEZ1Q99689 392 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 LRRCC1Q9C099 1032 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 RNF208Q9H0X6 261 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 PAG1Q9NWQ8 432 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
PTPN13-207ENST00000508063 ZNF532Q9HCE3 1301 aa13.4□□□□□ -0.26
PTPN13-207ENST00000508063 GJA8P48165 433 aa13.4□□□□□ -0.26
PTPN13-207ENST00000508063 USP14P54578 494 aa13.4□□□□□ -0.26
PTPN13-207ENST00000508063 JAG1P78504 1218 aa13.4□□□□□ -0.26
PTPN13-207ENST00000508063 ABCB5Q2M3G0 1257 aa13.4□□□□□ -0.26
PTPN13-207ENST00000508063 HAUS7Q99871 368 aa13.4□□□□□ -0.26
PTPN13-207ENST00000508063 BOLA2Q9H3K6 86 aa13.4□□□□□ -0.26
PTPN13-207ENST00000508063 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
PTPN13-207ENST00000508063 BRCA2P51587 3418 aa13.39□□□□□ -0.27
PTPN13-207ENST00000508063 TCRBV5S4A2TA0A5A2 114 aa13.39□□□□□ -0.27
PTPN13-207ENST00000508063 HERVK_113P62684 666 aa13.39□□□□□ -0.27
PTPN13-207ENST00000508063 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
PTPN13-207ENST00000508063 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
PTPN13-207ENST00000508063 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
PTPN13-207ENST00000508063 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
PTPN13-207ENST00000508063 NAV1Q8NEY1 1877 aa13.39□□□□□ -0.27
PTPN13-207ENST00000508063 MKI67P46013 3256 aaKnown RBP13.38□□□□□ -0.27
PTPN13-207ENST00000508063 INHAP05111 366 aa13.38□□□□□ -0.27
PTPN13-207ENST00000508063 ELNP15502 786 aa13.38□□□□□ -0.27
PTPN13-207ENST00000508063 ADD2P35612 726 aa13.38□□□□□ -0.27
PTPN13-207ENST00000508063 PLCD1P51178 756 aa13.38□□□□□ -0.27
PTPN13-207ENST00000508063 C20orf194Q5TEA3 1177 aa13.38□□□□□ -0.27
PTPN13-207ENST00000508063 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
PTPN13-207ENST00000508063 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms