RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 BIN2Q9UBW5 565 aaPredicted RBP25.32■■□□□ 1.64
CLDND1-216ENST00000507944 TNPO2O14787 897 aaKnown RBP25.31■■□□□ 1.64
CLDND1-216ENST00000507944 SLC34A2O95436 690 aa25.31■■□□□ 1.64
CLDND1-216ENST00000507944 BACE1P56817 501 aa25.31■■□□□ 1.64
CLDND1-216ENST00000507944 MTMR2Q13614 643 aa25.31■■□□□ 1.64
CLDND1-216ENST00000507944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.31■■□□□ 1.64
CLDND1-216ENST00000507944 GCLCP48506 637 aaPredicted RBP25.3■■□□□ 1.64
CLDND1-216ENST00000507944 FLT3LGP49771 235 aa25.3■■□□□ 1.64
CLDND1-216ENST00000507944 FAM110CQ1W6H9 321 aa25.3■■□□□ 1.64
CLDND1-216ENST00000507944 SHROOM1Q2M3G4 852 aaPredicted RBP25.3■■□□□ 1.64
CLDND1-216ENST00000507944 ASCC2Q9H1I8 757 aaPredicted RBP25.3■■□□□ 1.64
CLDND1-216ENST00000507944 TMOD4Q9NZQ9 345 aa25.3■■□□□ 1.64
CLDND1-216ENST00000507944 ZBTB21Q9ULJ3 1066 aa25.3■■□□□ 1.64
CLDND1-216ENST00000507944 C19orf81C9J6K1 198 aa25.29■■□□□ 1.64
CLDND1-216ENST00000507944 UBXN2AP68543 259 aa25.29■■□□□ 1.64
CLDND1-216ENST00000507944 SLC9C2Q5TAH2 1124 aa25.29■■□□□ 1.64
CLDND1-216ENST00000507944 SLAIN1Q8ND83 568 aa25.29■■□□□ 1.64
CLDND1-216ENST00000507944 RIOK1Q9BRS2 568 aaKnown RBP25.29■■□□□ 1.64
CLDND1-216ENST00000507944 MAGEB6P1A0A0J9YX57 407 aa25.28■■□□□ 1.64
CLDND1-216ENST00000507944 USP17L10C9JJH3 530 aa25.28■■□□□ 1.64
CLDND1-216ENST00000507944 ADCY3O60266 1144 aa25.28■■□□□ 1.64
CLDND1-216ENST00000507944 PDE3AQ14432 1141 aa25.28■■□□□ 1.64
CLDND1-216ENST00000507944 TTC6Q86TZ1 520 aa25.28■■□□□ 1.64
CLDND1-216ENST00000507944 COA7Q96BR5 231 aa25.28■■□□□ 1.64
CLDND1-216ENST00000507944 DNAJC2Q99543 621 aaKnown RBP25.28■■□□□ 1.64
CLDND1-216ENST00000507944 GOLIM4O00461 696 aa25.27■■□□□ 1.64
CLDND1-216ENST00000507944 CCL5P13501 91 aa25.27■■□□□ 1.64
CLDND1-216ENST00000507944 PDE6AP16499 860 aa25.27■■□□□ 1.64
CLDND1-216ENST00000507944 C20orf194Q5TEA3 1177 aa25.27■■□□□ 1.64
CLDND1-216ENST00000507944 TATDN1Q6P1N9 297 aa25.27■■□□□ 1.64
CLDND1-216ENST00000507944 EHD4Q9H223 541 aa25.27■■□□□ 1.64
CLDND1-216ENST00000507944 SERPINB13Q9UIV8 391 aa25.27■■□□□ 1.64
CLDND1-216ENST00000507944 GH2P01242 217 aa25.26■■□□□ 1.63
CLDND1-216ENST00000507944 HOXA7P31268 230 aaPredicted RBP25.26■■□□□ 1.63
CLDND1-216ENST00000507944 IRX3P78415 501 aaPredicted RBP25.26■■□□□ 1.63
CLDND1-216ENST00000507944 IRF5Q13568 498 aa25.26■■□□□ 1.63
CLDND1-216ENST00000507944 NKX2-3Q8TAU0 364 aa25.26■■□□□ 1.63
CLDND1-216ENST00000507944 RNF208Q9H0X6 261 aa25.26■■□□□ 1.63
CLDND1-216ENST00000507944 GJB1P08034 283 aa25.25■■□□□ 1.63
CLDND1-216ENST00000507944 PXYLP1Q8TE99 480 aa25.25■■□□□ 1.63
CLDND1-216ENST00000507944 CEP290O15078 2479 aa25.24■■□□□ 1.63
CLDND1-216ENST00000507944 ZNF532Q9HCE3 1301 aa25.24■■□□□ 1.63
CLDND1-216ENST00000507944 ELNP15502 786 aa25.24■■□□□ 1.63
CLDND1-216ENST00000507944 SHISA4Q96DD7 197 aa25.24■■□□□ 1.63
CLDND1-216ENST00000507944 EDC3Q96F86 508 aaKnown RBP25.24■■□□□ 1.63
CLDND1-216ENST00000507944 P2RX7Q99572 595 aaKnown RBP25.24■■□□□ 1.63
CLDND1-216ENST00000507944 CRNKL1Q9BZJ0 848 aaKnown RBP25.24■■□□□ 1.63
CLDND1-216ENST00000507944 BOLA2Q9H3K6 86 aa25.24■■□□□ 1.63
CLDND1-216ENST00000507944 POLR3DP05423 398 aaPredicted RBP25.23■■□□□ 1.63
CLDND1-216ENST00000507944 GJA8P48165 433 aa25.23■■□□□ 1.63
CLDND1-216ENST00000507944 PLCD1P51178 756 aa25.23■■□□□ 1.63
CLDND1-216ENST00000507944 CERKLQ49MI3 558 aaPredicted RBP25.23■■□□□ 1.63
CLDND1-216ENST00000507944 EMILIN3Q9NT22 766 aa25.23■■□□□ 1.63
CLDND1-216ENST00000507944 MORF4L1Q9UBU8 362 aa25.23■■□□□ 1.63
CLDND1-216ENST00000507944 TAOK2Q9UL54 1235 aa25.23■■□□□ 1.63
CLDND1-216ENST00000507944 TCRBV5S4A2TA0A5A2 114 aa25.22■■□□□ 1.63
CLDND1-216ENST00000507944 ATP5JP18859 108 aa25.22■■□□□ 1.63
CLDND1-216ENST00000507944 USP17L2Q6R6M4 530 aa25.22■■□□□ 1.63
CLDND1-216ENST00000507944 UNC93B1Q9H1C4 597 aa25.22■■□□□ 1.63
CLDND1-216ENST00000507944 PAG1Q9NWQ8 432 aa25.22■■□□□ 1.63
CLDND1-216ENST00000507944 INHAP05111 366 aa25.21■■□□□ 1.63
CLDND1-216ENST00000507944 ABCB5Q2M3G0 1257 aa25.21■■□□□ 1.63
CLDND1-216ENST00000507944 GCC1Q96CN9 775 aa25.21■■□□□ 1.63
CLDND1-216ENST00000507944 MCM9Q9NXL9 1143 aa25.21■■□□□ 1.63
CLDND1-216ENST00000507944 HERVK_113P62684 666 aa25.2■■□□□ 1.62
CLDND1-216ENST00000507944 RAB3GAP1Q15042 981 aa25.2■■□□□ 1.62
CLDND1-216ENST00000507944 LRRCC1Q9C099 1032 aa25.2■■□□□ 1.62
CLDND1-216ENST00000507944 CABP5Q9NP86 173 aa25.2■■□□□ 1.62
CLDND1-216ENST00000507944 SHMT1P34896 483 aa25.19■■□□□ 1.62
CLDND1-216ENST00000507944 LCORLQ8N3X6 602 aa25.19■■□□□ 1.62
CLDND1-216ENST00000507944 GPRC5AQ8NFJ5 357 aa25.19■■□□□ 1.62
CLDND1-216ENST00000507944 U2AF1L4Q8WU68 220 aaKnown RBP25.19■■□□□ 1.62
CLDND1-216ENST00000507944 SDR42E1Q8WUS8 393 aa25.19■■□□□ 1.62
CLDND1-216ENST00000507944 FEZ1Q99689 392 aa25.19■■□□□ 1.62
CLDND1-216ENST00000507944 HAUS7Q99871 368 aa25.19■■□□□ 1.62
CLDND1-216ENST00000507944 GJD2Q9UKL4 321 aa25.19■■□□□ 1.62
CLDND1-216ENST00000507944 ADD2P35612 726 aa25.18■■□□□ 1.62
CLDND1-216ENST00000507944 GABPAQ06546 454 aa25.18■■□□□ 1.62
CLDND1-216ENST00000507944 TXNRD2Q9NNW7 524 aa25.18■■□□□ 1.62
CLDND1-216ENST00000507944 DCP1AQ9NPI6 582 aaPredicted RBP25.18■■□□□ 1.62
CLDND1-216ENST00000507944 RBPJLQ9UBG7 517 aa25.18■■□□□ 1.62
CLDND1-216ENST00000507944 NAV1Q8NEY1 1877 aa25.17■■□□□ 1.62
CLDND1-216ENST00000507944 SMARCA5O60264 1052 aaPredicted RBP25.17■■□□□ 1.62
CLDND1-216ENST00000507944 PEX10O60683 326 aa25.17■■□□□ 1.62
CLDND1-216ENST00000507944 SGPL1O95470 568 aa25.17■■□□□ 1.62
CLDND1-216ENST00000507944 ZYXQ15942 572 aaKnown RBP25.17■■□□□ 1.62
CLDND1-216ENST00000507944 C12orf42Q96LP6 360 aa25.17■■□□□ 1.62
CLDND1-216ENST00000507944 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.17■■□□□ 1.62
CLDND1-216ENST00000507944 ARMT1Q9H993 441 aa25.17■■□□□ 1.62
CLDND1-216ENST00000507944 USP14P54578 494 aa25.16■■□□□ 1.62
CLDND1-216ENST00000507944 EVX2Q03828 476 aa25.16■■□□□ 1.62
CLDND1-216ENST00000507944 SLFNL1Q499Z3 407 aa25.16■■□□□ 1.62
CLDND1-216ENST00000507944 DDX60LQ5H9U9 1706 aaKnown RBP25.16■■□□□ 1.62
CLDND1-216ENST00000507944 ACER1Q8TDN7 264 aa25.16■■□□□ 1.62
CLDND1-216ENST00000507944 GTF3C2Q8WUA4 911 aaPredicted RBP25.16■■□□□ 1.62
CLDND1-216ENST00000507944 KIAA1683Q9H0B3 1180 aa25.16■■□□□ 1.62
CLDND1-216ENST00000507944 USP17L15C9J2P7 530 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 USP17L13C9JLJ4 530 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 USP17L11C9JVI0 530 aa25.15■■□□□ 1.62
CLDND1-216ENST00000507944 USP17L18D6R9N7 530 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms