RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 R3HDM1Q15032 1099 aaKnown RBP8.64□□□□□ -1.03
CLCN3-206ENST00000507875 RINLQ6ZS11 566 aa8.64□□□□□ -1.03
CLCN3-206ENST00000507875 RASGRP4Q8TDF6 673 aa8.64□□□□□ -1.03
CLCN3-206ENST00000507875 EAF1Q96JC9 268 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-206ENST00000507875 NPHS2Q9NP85 383 aa8.64□□□□□ -1.03
CLCN3-206ENST00000507875 WBP1LQ9NX94 342 aa8.64□□□□□ -1.03
CLCN3-206ENST00000507875 PNMA2Q9UL42 364 aa8.64□□□□□ -1.03
CLCN3-206ENST00000507875 AFDNP55196 1824 aaKnown RBP8.64□□□□□ -1.03
CLCN3-206ENST00000507875 ANKRD36CQ5JPF3 1778 aa8.64□□□□□ -1.03
CLCN3-206ENST00000507875 FBXO24O75426 580 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 GYS2P54840 703 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 TBX4P57082 545 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 RAB33AQ14088 237 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 JAMLQ86YT9 394 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 ALDH16A1Q8IZ83 802 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 CCDC74AQ96AQ1 378 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 RGPD3A6NKT7 1758 aaPredicted RBP8.63□□□□□ -1.03
CLCN3-206ENST00000507875 RGPD4Q7Z3J3 1758 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 BACH1O14867 736 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 CDC45O75419 566 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 FAM169BQ8N8A8 192 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 MYO19Q96H55 970 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 SLC4A9Q96Q91 983 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 TRIM55Q9BYV6 548 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
CLCN3-206ENST00000507875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.63□□□□□ -1.03
CLCN3-206ENST00000507875 EML1O00423 815 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 KCNQ3O43525 872 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 PDGFRBP09619 1106 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 ANP32AP39687 249 aaKnown RBP8.62□□□□□ -1.03
CLCN3-206ENST00000507875 KRT24Q2M2I5 525 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 PANK1Q8TE04 598 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 IFT43Q96FT9 208 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 ZNF496Q96IT1 587 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-206ENST00000507875 LEMD3Q9Y2U8 911 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 HCLS1P14317 486 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-206ENST00000507875 ADD1P35611 737 aaKnown RBP8.62□□□□□ -1.03
CLCN3-206ENST00000507875 C21orf62-AS1Q17RA5 79 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 ODR4Q5SWX8 454 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 CCDC181Q5TID7 509 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 TREML1Q86YW5 311 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 TMEM57Q8N5G2 664 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 BRINP2Q9C0B6 783 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 TAF1LQ8IZX4 1826 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 SRCAPQ6ZRS2 3230 aa8.62□□□□□ -1.03
CLCN3-206ENST00000507875 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 RLBP1P12271 317 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 SKAP1Q86WV1 359 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 PIGBQ92521 554 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 RWDD1Q9H446 243 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-206ENST00000507875 ATG3Q9NT62 314 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 STARD3NLO95772 234 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 PSMA6P60900 246 aaKnown RBP8.61□□□□□ -1.03
CLCN3-206ENST00000507875 SQSTM1Q13501 440 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 ITPRIPQ8IWB1 547 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 ZBTB40Q9NUA8 1239 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 UBP1Q9NZI7 540 aa8.61□□□□□ -1.03
CLCN3-206ENST00000507875 KAT6BQ8WYB5 2073 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
CLCN3-206ENST00000507875 GNAI3P08754 354 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 SMTNP53814 917 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 NFX1Q12986 1120 aaKnown RBP8.6□□□□□ -1.03
CLCN3-206ENST00000507875 SLC39A6Q13433 755 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 HDAC1Q13547 482 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-206ENST00000507875 KSR2Q6VAB6 950 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 IPO9Q96P70 1041 aaKnown RBP8.6□□□□□ -1.03
CLCN3-206ENST00000507875 FCF1Q9Y324 198 aaKnown RBP8.6□□□□□ -1.03
CLCN3-206ENST00000507875 IL2RAP01589 272 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 EIF2S2P20042 333 aaKnown RBP8.6□□□□□ -1.03
CLCN3-206ENST00000507875 CDKN1CP49918 316 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-206ENST00000507875 ARID5BQ14865 1188 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 MAP3K11Q16584 847 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 KIAA0825Q8IV33 1275 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 SPOCK3Q9BQ16 436 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 ZNF232Q9UNY5 417 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 TLR6Q9Y2C9 796 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 BCORQ6W2J9 1755 aa8.6□□□□□ -1.03
CLCN3-206ENST00000507875 KIF4AO95239 1232 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 IGHDP01880 384 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 CRKP46108 304 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 MAP3K10Q02779 954 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 SEPT6Q14141 434 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 TXNRD1Q16881 649 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 VASH1Q7L8A9 365 aaPredicted RBP8.59□□□□□ -1.03
CLCN3-206ENST00000507875 RPAP2Q8IXW5 612 aaPredicted RBP8.59□□□□□ -1.03
CLCN3-206ENST00000507875 DNAAF4Q8WXU2 420 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 ACSBG1Q96GR2 724 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 MTA3Q9BTC8 594 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 SH3BP1Q9Y3L3 701 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 SOWAHBA6NEL2 793 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 LILRA1O75019 489 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 TNFRSF21O75509 655 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 MTFR1Q15390 333 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 FBXL19Q6PCT2 694 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 G2E3Q7L622 706 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 ZNF295-AS1Q8N0V1 137 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 ZNF516Q92618 1163 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms