RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 CATIPQ7Z7H3 387 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 METTL16Q86W50 562 aaKnown RBP25.32■■□□□ 1.64
SPCS3-203ENST00000507678 IQCA1Q86XH1 822 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 NYXQ9GZU5 481 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 USP27XA6NNY8 438 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 TPTE2Q6XPS3 522 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 FBXO33Q7Z6M2 555 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 RTCBQ9Y3I0 505 aaKnown RBP25.32■■□□□ 1.64
SPCS3-203ENST00000507678 CNTNAP4Q9C0A0 1308 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 MYH2Q9UKX2 1941 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 SHISA4Q96DD7 197 aa25.31■■□□□ 1.64
SPCS3-203ENST00000507678 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.31■■□□□ 1.64
SPCS3-203ENST00000507678 ANAPC4Q9UJX5 808 aa25.31■■□□□ 1.64
SPCS3-203ENST00000507678 LAMB2P55268 1798 aa25.31■■□□□ 1.64
SPCS3-203ENST00000507678 RPS6KA4O75676 772 aa25.31■■□□□ 1.64
SPCS3-203ENST00000507678 TNNT1P13805 278 aa25.31■■□□□ 1.64
SPCS3-203ENST00000507678 GRAMD1CQ8IYS0 662 aa25.31■■□□□ 1.64
SPCS3-203ENST00000507678 ARHGEF1Q92888 912 aaKnown RBP25.31■■□□□ 1.64
SPCS3-203ENST00000507678 POLR2DO15514 142 aaKnown RBP25.3■■□□□ 1.64
SPCS3-203ENST00000507678 TPM4P67936 248 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 NCAPHQ15003 741 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 KRBA2Q6ZNG9 492 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 FOXP4Q8IVH2 680 aaPredicted RBP25.3■■□□□ 1.64
SPCS3-203ENST00000507678 FOXP1Q9H334 677 aaPredicted RBP25.3■■□□□ 1.64
SPCS3-203ENST00000507678 PCDHA5Q9Y5H7 936 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 COL5A3P25940 1745 aaPredicted RBP25.3■■□□□ 1.64
SPCS3-203ENST00000507678 BAZ2BQ9UIF8 2168 aaKnown RBP25.3■■□□□ 1.64
SPCS3-203ENST00000507678 SLC10A5Q5PT55 438 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 GPR101Q96P66 508 aaPredicted RBP25.3■■□□□ 1.64
SPCS3-203ENST00000507678 ANKIB1Q9P2G1 1089 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 LTBP4Q8N2S1 1624 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 USP49Q70CQ1 688 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 TIGD1Q96MW7 591 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 BRIP1Q9BX63 1249 aa25.3■■□□□ 1.64
SPCS3-203ENST00000507678 CACNA1SQ13698 1873 aa25.29■■□□□ 1.64
SPCS3-203ENST00000507678 RILPL1Q5EBL4 403 aa25.29■■□□□ 1.64
SPCS3-203ENST00000507678 EARS2Q5JPH6 523 aaKnown RBP25.29■■□□□ 1.64
SPCS3-203ENST00000507678 VPS72Q15906 364 aa25.29■■□□□ 1.64
SPCS3-203ENST00000507678 UBAP1LF5GYI3 381 aa25.28■■□□□ 1.64
SPCS3-203ENST00000507678 MTERF4Q7Z6M4 381 aaKnown RBP25.28■■□□□ 1.64
SPCS3-203ENST00000507678 DCP1AQ9NPI6 582 aaPredicted RBP25.28■■□□□ 1.64
SPCS3-203ENST00000507678 FBXO2Q9UK22 296 aaPredicted RBP25.28■■□□□ 1.64
SPCS3-203ENST00000507678 MTMR7Q9Y216 660 aa25.28■■□□□ 1.64
SPCS3-203ENST00000507678 SMTNL1A8MU46 457 aa25.28■■□□□ 1.64
SPCS3-203ENST00000507678 ZNF827Q17R98 1081 aa25.28■■□□□ 1.64
SPCS3-203ENST00000507678 NOM1Q5C9Z4 860 aaKnown RBP25.28■■□□□ 1.64
SPCS3-203ENST00000507678 DZIP1Q86YF9 867 aaKnown RBP25.28■■□□□ 1.64
SPCS3-203ENST00000507678 BPIFA3Q9BQP9 254 aa25.28■■□□□ 1.64
SPCS3-203ENST00000507678 CRNKL1Q9BZJ0 848 aaKnown RBP25.28■■□□□ 1.64
SPCS3-203ENST00000507678 SERTAD1Q9UHV2 236 aa25.28■■□□□ 1.64
SPCS3-203ENST00000507678 TUBE1Q9UJT0 475 aa25.28■■□□□ 1.64
SPCS3-203ENST00000507678 NID2Q14112 1375 aa25.27■■□□□ 1.64
SPCS3-203ENST00000507678 PKN1Q16512 942 aa25.27■■□□□ 1.64
SPCS3-203ENST00000507678 RGS22Q8NE09 1264 aa25.27■■□□□ 1.64
SPCS3-203ENST00000507678 RNF26Q9BY78 433 aaPredicted RBP25.27■■□□□ 1.64
SPCS3-203ENST00000507678 PRR29P0C7W0 189 aa25.27■■□□□ 1.64
SPCS3-203ENST00000507678 CCZ1BP86790 482 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 CCZ1P86791 482 aaPredicted RBP25.26■■□□□ 1.63
SPCS3-203ENST00000507678 FANCCQ00597 558 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 OLFM4Q6UX06 510 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 MCM9Q9NXL9 1143 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 SERPINC1P01008 464 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 USP17L8P0C7I0 530 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 XBP1P17861 261 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 RFC4P35249 363 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 ANKRD2Q9GZV1 360 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 CSRNP2Q9H175 543 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 USP21Q9UK80 565 aa25.26■■□□□ 1.63
SPCS3-203ENST00000507678 PTPREP23469 700 aa25.25■■□□□ 1.63
SPCS3-203ENST00000507678 TROAPQ12815 778 aa25.25■■□□□ 1.63
SPCS3-203ENST00000507678 EP400Q96L91 3159 aa25.25■■□□□ 1.63
SPCS3-203ENST00000507678 TSPY2A6NKD2 308 aa25.25■■□□□ 1.63
SPCS3-203ENST00000507678 PDE4BQ07343 736 aa25.25■■□□□ 1.63
SPCS3-203ENST00000507678 MTA3Q9BTC8 594 aa25.25■■□□□ 1.63
SPCS3-203ENST00000507678 WNT7AO00755 349 aa25.24■■□□□ 1.63
SPCS3-203ENST00000507678 DPF2Q92785 391 aa25.24■■□□□ 1.63
SPCS3-203ENST00000507678 KRT2P35908 639 aa25.24■■□□□ 1.63
SPCS3-203ENST00000507678 NFIXQ14938 502 aa25.24■■□□□ 1.63
SPCS3-203ENST00000507678 BMP6P22004 513 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 MYL5Q02045 173 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 DMTNQ08495 405 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 CFAP100Q494V2 611 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 HSD3B7Q9H2F3 369 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 FANCLQ9NW38 375 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 DUOX1Q9NRD9 1551 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 TM4SF1P30408 202 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 POSTNQ15063 836 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 DIXDC1Q155Q3 683 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 MYH13Q9UKX3 1938 aa25.23■■□□□ 1.63
SPCS3-203ENST00000507678 FAM237AA0A1B0GTK4 181 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 SEMA3EO15041 775 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 VEGFAP15692 232 aaPredicted RBP25.22■■□□□ 1.63
SPCS3-203ENST00000507678 FUT2Q10981 343 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 ZNF174Q15697 407 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 CTCFLQ8NI51 663 aaPredicted RBP25.22■■□□□ 1.63
SPCS3-203ENST00000507678 CASZ1Q86V15 1759 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 TRIM75PA6NK02 468 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 NEMFO60524 1076 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 UBASH3AP57075 661 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 RC3H1Q5TC82 1133 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms