RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.18□□□□□ -0.62
COPS4-205ENST00000507376 MYO5AQ9Y4I1 1855 aaKnown RBP11.17□□□□□ -0.62
COPS4-205ENST00000507376 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
COPS4-205ENST00000507376 IFIT1P09914 478 aaKnown RBP11.17□□□□□ -0.62
COPS4-205ENST00000507376 SLC5A1P13866 664 aa11.17□□□□□ -0.62
COPS4-205ENST00000507376 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
COPS4-205ENST00000507376 BTDP43251 543 aa11.17□□□□□ -0.62
COPS4-205ENST00000507376 ATN1P54259 1190 aaPredicted RBP11.17□□□□□ -0.62
COPS4-205ENST00000507376 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
COPS4-205ENST00000507376 IDI2Q9BXS1 227 aa11.17□□□□□ -0.62
COPS4-205ENST00000507376 CHMP4AQ9BY43 222 aa11.17□□□□□ -0.62
COPS4-205ENST00000507376 FLRT1Q9NZU1 646 aa11.17□□□□□ -0.62
COPS4-205ENST00000507376 SUGT1Q9Y2Z0 365 aa11.17□□□□□ -0.62
COPS4-205ENST00000507376 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
COPS4-205ENST00000507376 EYA2O00167 538 aa11.16□□□□□ -0.62
COPS4-205ENST00000507376 RHBDL3P58872 404 aa11.16□□□□□ -0.62
COPS4-205ENST00000507376 MAP3K10Q02779 954 aa11.16□□□□□ -0.62
COPS4-205ENST00000507376 MTMR2Q13614 643 aa11.16□□□□□ -0.62
COPS4-205ENST00000507376 RASGRF1Q13972 1273 aa11.16□□□□□ -0.62
COPS4-205ENST00000507376 PA2G4Q9UQ80 394 aaKnown RBP11.16□□□□□ -0.62
COPS4-205ENST00000507376 STK24Q9Y6E0 443 aa11.16□□□□□ -0.62
COPS4-205ENST00000507376 FOCADQ5VW36 1801 aa11.15□□□□□ -0.62
COPS4-205ENST00000507376 CTNND1O60716 968 aaKnown RBP11.15□□□□□ -0.62
COPS4-205ENST00000507376 ENTPD3O75355 529 aa11.15□□□□□ -0.62
COPS4-205ENST00000507376 SHHQ15465 462 aa11.15□□□□□ -0.62
COPS4-205ENST00000507376 ATP2B3Q16720 1220 aa11.15□□□□□ -0.62
COPS4-205ENST00000507376 Q3C1V9 767 aa11.15□□□□□ -0.62
COPS4-205ENST00000507376 ZNF697Q5TEC3 545 aa11.15□□□□□ -0.62
COPS4-205ENST00000507376 DNAJC18Q9H819 358 aa11.15□□□□□ -0.62
COPS4-205ENST00000507376 MROH7-TTC4A0A0A0MT08 1334 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 MAP3K13O43283 966 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 ZKSCAN1P17029 563 aaPredicted RBP11.14□□□□□ -0.63
COPS4-205ENST00000507376 COL9A1P20849 921 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
COPS4-205ENST00000507376 TRPV1Q8NER1 839 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 LPIN2Q92539 896 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 USP6NLQ92738 828 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 P2RX7Q99572 595 aaKnown RBP11.14□□□□□ -0.63
COPS4-205ENST00000507376 USP44Q9H0E7 712 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 MORF4L1Q9UBU8 362 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 METRNQ9UJH8 293 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
COPS4-205ENST00000507376 SALL1Q9NSC2 1324 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
COPS4-205ENST00000507376 GDF11O95390 407 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 RTP1P59025 263 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 ANO1Q5XXA6 986 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 FAM109BQ6ICB4 259 aaPredicted RBP11.13□□□□□ -0.63
COPS4-205ENST00000507376 SH3RF1Q7Z6J0 888 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 DZIP1Q86YF9 867 aaKnown RBP11.13□□□□□ -0.63
COPS4-205ENST00000507376 ZNF280CQ8ND82 737 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
COPS4-205ENST00000507376 PAGR1Q9BTK6 254 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 SENP6Q9GZR1 1112 aaPredicted RBP11.13□□□□□ -0.63
COPS4-205ENST00000507376 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
COPS4-205ENST00000507376 CNMDO75829 334 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 EPHB4P54760 987 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 HERVK_113P62684 666 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 MECOMQ03112 1051 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 CCDC102BQ68D86 513 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 GPR142Q7Z601 462 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 SLC39A7Q92504 469 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.12□□□□□ -0.63
COPS4-205ENST00000507376 RBPJLQ9UBG7 517 aa11.12□□□□□ -0.63
COPS4-205ENST00000507376 FOSL2P15408 326 aa11.11□□□□□ -0.63
COPS4-205ENST00000507376 ITGB8P26012 769 aa11.11□□□□□ -0.63
COPS4-205ENST00000507376 GCLCP48506 637 aaPredicted RBP11.11□□□□□ -0.63
COPS4-205ENST00000507376 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
COPS4-205ENST00000507376 MORN1Q5T089 497 aa11.11□□□□□ -0.63
COPS4-205ENST00000507376 MRPL50Q8N5N7 158 aaKnown RBP11.11□□□□□ -0.63
COPS4-205ENST00000507376 APBA2Q99767 749 aa11.11□□□□□ -0.63
COPS4-205ENST00000507376 OSBPL5Q9H0X9 879 aaPredicted RBP11.11□□□□□ -0.63
COPS4-205ENST00000507376 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
COPS4-205ENST00000507376 WDR70Q9NW82 654 aa11.11□□□□□ -0.63
COPS4-205ENST00000507376 ATP11BQ9Y2G3 1177 aa11.11□□□□□ -0.63
COPS4-205ENST00000507376 A0A0G2JMZ2 1700 aa11.1□□□□□ -0.63
COPS4-205ENST00000507376 CAP2P40123 477 aa11.1□□□□□ -0.63
COPS4-205ENST00000507376 ZYXQ15942 572 aaKnown RBP11.1□□□□□ -0.63
COPS4-205ENST00000507376 TRIM60Q495X7 471 aa11.1□□□□□ -0.63
COPS4-205ENST00000507376 SH3D19Q5HYK7 790 aa11.1□□□□□ -0.63
COPS4-205ENST00000507376 GJC2Q5T442 439 aaPredicted RBP11.1□□□□□ -0.63
COPS4-205ENST00000507376 NPLOC4Q8TAT6 608 aa11.1□□□□□ -0.63
COPS4-205ENST00000507376 SH3RF3Q8TEJ3 882 aaPredicted RBP11.1□□□□□ -0.63
COPS4-205ENST00000507376 BADQ92934 168 aa11.1□□□□□ -0.63
COPS4-205ENST00000507376 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
COPS4-205ENST00000507376 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 C7P10643 843 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 CYP2C19P33261 490 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 TIMM10P62072 90 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 ERVK-9P63128 1117 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 ERVK-24P63145 666 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
COPS4-205ENST00000507376 ADGRA1Q86SQ6 560 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 SOCS4Q8WXH5 440 aa11.09□□□□□ -0.63
COPS4-205ENST00000507376 TRIM43Q96BQ3 446 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms