RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 GJD2Q9UKL4 321 aa16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
POLR2J3-212ENST00000507355 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 CYP2B6P20813 491 aa16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 CAP2P40123 477 aa16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 PABPC4Q13310 644 aaKnown RBP eCLIP16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 ZNF280CQ8ND82 737 aa16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 ASCC2Q9H1I8 757 aaPredicted RBP16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 PFASO15067 1338 aa16.44■□□□□ 0.22
POLR2J3-212ENST00000507355 PEX10O60683 326 aa16.43■□□□□ 0.22
POLR2J3-212ENST00000507355 BAG3O95817 575 aa16.43■□□□□ 0.22
POLR2J3-212ENST00000507355 CYP2E1P05181 493 aaPredicted RBP16.43■□□□□ 0.22
POLR2J3-212ENST00000507355 COL25A1Q9BXS0 654 aaPredicted RBP16.43■□□□□ 0.22
POLR2J3-212ENST00000507355 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
POLR2J3-212ENST00000507355 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
POLR2J3-212ENST00000507355 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
POLR2J3-212ENST00000507355 PPP4CP60510 307 aa16.42■□□□□ 0.22
POLR2J3-212ENST00000507355 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
POLR2J3-212ENST00000507355 MDM2Q00987 491 aaPredicted RBP16.42■□□□□ 0.22
POLR2J3-212ENST00000507355 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
POLR2J3-212ENST00000507355 HERC5Q9UII4 1024 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-212ENST00000507355 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
POLR2J3-212ENST00000507355 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
POLR2J3-212ENST00000507355 ZAP70P43403 619 aa16.41■□□□□ 0.22
POLR2J3-212ENST00000507355 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-212ENST00000507355 TGFBRAP1Q8WUH2 860 aa16.41■□□□□ 0.22
POLR2J3-212ENST00000507355 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-212ENST00000507355 TBC1D2Q9BYX2 928 aa16.41■□□□□ 0.22
POLR2J3-212ENST00000507355 DHX36Q9H2U1 1008 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-212ENST00000507355 NOP58Q9Y2X3 529 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-212ENST00000507355 RLBP1P12271 317 aa16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 PLCG2P16885 1265 aa16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 MTMR2Q13614 643 aa16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 ADGRA1Q86SQ6 560 aa16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 FOXP4Q8IVH2 680 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 MAPKAPK5Q8IW41 473 aa16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 FAM161BQ96MY7 647 aa16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 CCDC8Q9H0W5 538 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-212ENST00000507355 ZKSCAN1P17029 563 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 LRRC26Q2I0M4 334 aa16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 MIER1Q8N108 512 aa16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 PIH1D3Q9NQM4 214 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 MORF4L1Q9UBU8 362 aa16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 DNAH12Q6ZR08 3092 aa16.39■□□□□ 0.21
POLR2J3-212ENST00000507355 CCND3P30281 292 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 DYNLL1P63167 89 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 JAG1P78504 1218 aa16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 CACNB2Q08289 660 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 SOCS4Q8WXH5 440 aa16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 NUDT12Q9BQG2 462 aa16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 TXNRD2Q9NNW7 524 aa16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 TMOD4Q9NZQ9 345 aa16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
POLR2J3-212ENST00000507355 MYO5AQ9Y4I1 1855 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 IGSF3O75054 1194 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 COL6A1P12109 1028 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 CYP7A1P22680 504 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 METTL16Q86W50 562 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 CRACR2BQ8N4Y2 399 aaPredicted RBP16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 GPRC5AQ8NFJ5 357 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 GUCD1Q96NT3 240 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 FLT1P17948 1338 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 VCANP13611 3396 aa16.37■□□□□ 0.21
POLR2J3-212ENST00000507355 FRMPD3Q5JV73 1810 aa16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 ASNSP08243 561 aa16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 BACE1P56817 501 aa16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 HERVK_113P62684 666 aa16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 CCL14Q16627 93 aa16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-212ENST00000507355 SIPA1L1O43166 1804 aa16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 GDF11O95390 407 aa16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 KCNA4P22459 653 aa16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 SHROOM1Q2M3G4 852 aaPredicted RBP16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 LHX8Q68G74 356 aa16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
POLR2J3-212ENST00000507355 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms