RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 AKAP4Q5JQC9 854 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 BLOC1S2Q6QNY1 142 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 CREBRFQ8IUR6 639 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 DRC7Q8IY82 874 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 RNF214Q8ND24 703 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 TTC14Q96N46 770 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 LLPHQ9BRT6 129 aaKnown RBP6.89□□□□□ -1.31
CLDND1-213ENST00000506927 OXCT2Q9BYC2 517 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-213ENST00000506927 TNMDQ9H2S6 317 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 MARK1Q9P0L2 795 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-213ENST00000506927 PLEKHG2Q9H7P9 1386 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 USP54Q70EL1 1684 aa6.89□□□□□ -1.31
CLDND1-213ENST00000506927 FAM208AQ9UK61 1670 aaKnown RBP6.89□□□□□ -1.31
CLDND1-213ENST00000506927 XRN1Q8IZH2 1706 aaKnown RBP6.89□□□□□ -1.31
CLDND1-213ENST00000506927 CHD2O14647 1828 aaKnown RBP6.88□□□□□ -1.31
CLDND1-213ENST00000506927 UBR1Q8IWV7 1749 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 DIP2BQ9P265 1576 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 F6X3S4 739 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 KIF20AO95235 890 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 BCRP11274 1271 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 GJB2P29033 226 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 CDC25BP30305 580 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 AK2P54819 239 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 MAP3K10Q02779 954 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 SFSWAPQ12872 951 aaKnown RBP6.88□□□□□ -1.31
CLDND1-213ENST00000506927 LAMC2Q13753 1193 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 PKP1Q13835 747 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 C1orf141Q5JVX7 400 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 FAM182BQ5T319 152 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 CLP1Q92989 425 aaKnown RBP6.88□□□□□ -1.31
CLDND1-213ENST00000506927 CEP63Q96MT8 703 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 JAKMIP1Q96N16 626 aaKnown RBP6.88□□□□□ -1.31
CLDND1-213ENST00000506927 ZNF396Q96N95 335 aaPredicted RBP6.88□□□□□ -1.31
CLDND1-213ENST00000506927 ARID3AQ99856 593 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 LSG1Q9H089 658 aaKnown RBP6.88□□□□□ -1.31
CLDND1-213ENST00000506927 QTRT2Q9H974 415 aaKnown RBP6.88□□□□□ -1.31
CLDND1-213ENST00000506927 KLK14Q9P0G3 267 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 SLAIN2Q9P270 581 aa6.88□□□□□ -1.31
CLDND1-213ENST00000506927 CGNQ9P2M7 1197 aaKnown RBP6.88□□□□□ -1.31
CLDND1-213ENST00000506927 SLIT1O75093 1534 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 ROBO2Q9HCK4 1378 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 PRR36Q9H6K5 1346 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 PNMA6EA0A0J9YXQ4 647 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 H3BQV1 296 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 FBLN1P23142 703 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 HOXC9P31274 260 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 GSDMDP57764 484 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 TYRO3Q06418 890 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 GRIN2CQ14957 1233 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 HIF1AQ16665 826 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 CWC27Q6UX04 472 aaKnown RBP6.87□□□□□ -1.31
CLDND1-213ENST00000506927 KSR2Q6VAB6 950 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-213ENST00000506927 G2E3Q7L622 706 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 PI4K2BQ8TCG2 481 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 UPF3BQ9BZI7 483 aaKnown RBP6.87□□□□□ -1.31
CLDND1-213ENST00000506927 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 CXXC1Q9P0U4 656 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-213ENST00000506927 BCS1LQ9Y276 419 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 TSPOAP1O95153 1857 aa6.87□□□□□ -1.31
CLDND1-213ENST00000506927 LMTK3Q96Q04 1460 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 CEMIPQ8WUJ3 1361 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 VPS37CA5D8V6 355 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-213ENST00000506927 BTBD11A6QL63 1104 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 SMTNL1A8MU46 457 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 FIBPO43427 364 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 MYO1BO43795 1136 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 DHX16O60231 1041 aaKnown RBP6.86□□□□□ -1.31
CLDND1-213ENST00000506927 HCLS1P14317 486 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-213ENST00000506927 FGD1P98174 961 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 DGKZQ13574 1117 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 NECTIN1Q15223 517 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 BEND3Q5T5X7 828 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 CAPN12Q6ZSI9 719 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 BTLAQ7Z6A9 289 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 ABTB2Q8N961 1025 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 LINS1Q8NG48 757 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 KIAA1524Q8TCG1 905 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 FOXD4L4Q8WXT5 416 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-213ENST00000506927 IP6K1Q92551 441 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 MAP4K1Q92918 833 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 MYO19Q96H55 970 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.86□□□□□ -1.31
CLDND1-213ENST00000506927 GGA1Q9UJY5 639 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 GDF2Q9UK05 429 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-213ENST00000506927 PALD1Q9ULE6 856 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 LRFN2Q9ULH4 789 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 CNPY2Q9Y2B0 182 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 AMOTL2Q9Y2J4 779 aa6.86□□□□□ -1.31
CLDND1-213ENST00000506927 ADAMTS13Q76LX8 1427 aa6.85□□□□□ -1.31
CLDND1-213ENST00000506927 PEAK1Q9H792 1746 aa6.85□□□□□ -1.31
CLDND1-213ENST00000506927 BECN2A8MW95 431 aa6.85□□□□□ -1.31
CLDND1-213ENST00000506927 TGFBR3LH3BV60 316 aa6.85□□□□□ -1.31
CLDND1-213ENST00000506927 OIP5O43482 229 aa6.85□□□□□ -1.31
CLDND1-213ENST00000506927 TPM1P09493 284 aa6.85□□□□□ -1.31
CLDND1-213ENST00000506927 ARAFP10398 606 aa6.85□□□□□ -1.31
CLDND1-213ENST00000506927 EIF4A1P60842 406 aaKnown RBP6.85□□□□□ -1.31
CLDND1-213ENST00000506927 RBM10P98175 930 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms