RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RASA1P20936 1047 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 HAND2P61296 217 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 PDE4BQ07343 736 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 C8orf34Q49A92 452 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 COL13A1Q5TAT6 717 aaPredicted RBP15.26■□□□□ 0.03
TCOF1-210ENST00000506767 STAG1Q8WVM7 1258 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 SLC10A4Q96EP9 437 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 CCDC17Q96LX7 622 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 ELP3Q9H9T3 547 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 ZNF287Q9HBT7 754 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 INCENPQ9NQS7 918 aa15.26■□□□□ 0.03
TCOF1-210ENST00000506767 PHIPQ8WWQ0 1821 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 SPDYE5A6NIY4 337 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 FAM155AB1AL88 458 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-210ENST00000506767 ORC4O43929 436 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 GDF11O95390 407 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 HSPA1AP0DMV8 641 aaKnown RBP15.25■□□□□ 0.03
TCOF1-210ENST00000506767 HSPA1BP0DMV9 641 aaKnown RBP15.25■□□□□ 0.03
TCOF1-210ENST00000506767 PCP11498 1178 aaKnown RBP15.25■□□□□ 0.03
TCOF1-210ENST00000506767 PTPRAP18433 802 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 ZNF157P51786 506 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-210ENST00000506767 SHROOM1Q2M3G4 852 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-210ENST00000506767 AKNAD1Q5T1N1 836 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 TBC1D10CQ8IV04 446 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 STK11IPQ8N1F8 1099 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 MKNK2Q9HBH9 465 aa15.25■□□□□ 0.03
TCOF1-210ENST00000506767 GREB1LQ9C091 1923 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-210ENST00000506767 PRDM1O75626 825 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 ASNSP08243 561 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 SLC10A3P09131 477 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 AKR1B1P15121 316 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 GUCY1A2P33402 732 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 PPATQ06203 517 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 ABCB5Q2M3G0 1257 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 ERO1BQ86YB8 467 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 RASAL3Q86YV0 1011 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 CCDC102AQ96A19 550 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 ZBTB21Q9ULJ3 1066 aa15.24■□□□□ 0.03
TCOF1-210ENST00000506767 SLC27A2O14975 620 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 GH2P01242 217 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 GJA5P36382 358 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 SPRYD7Q5W111 196 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 CREB3L3Q68CJ9 461 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 CYP4F22Q6NT55 531 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 MFSD6Q6ZSS7 791 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 ZNF444Q8N0Y2 327 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-210ENST00000506767 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 KCNB2Q92953 911 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 WNK4Q96J92 1243 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.23■□□□□ 0.03
TCOF1-210ENST00000506767 USP26Q9BXU7 913 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 RNF41Q9H4P4 317 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-210ENST00000506767 CABP5Q9NP86 173 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 PICK1Q9NRD5 415 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-210ENST00000506767 TAF6LQ9Y6J9 622 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 PCNTO95613 3336 aa15.23■□□□□ 0.03
TCOF1-210ENST00000506767 USP17L5A8MUK1 530 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
TCOF1-210ENST00000506767 SEC24BO95487 1268 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 ZBTB48P10074 688 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-210ENST00000506767 HSPA4P34932 840 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 NT5C2P49902 561 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 PPIL2Q13356 520 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 TMEM179Q6ZVK1 233 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 NEDD1Q8NHV4 660 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 NKX2-3Q8TAU0 364 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 TBC1D2Q9BYX2 928 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 PLIN4Q96Q06 1357 aa15.22■□□□□ 0.03
TCOF1-210ENST00000506767 NEDD4P46934 1319 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 IGKV6D-41A0A0C4DH26 115 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 E7EWF7 191 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 ECE1P42892 770 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 TFAP4Q01664 338 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 SEPT2Q15019 361 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 STOX1Q6ZVD7 989 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 CCDC84Q86UT8 332 aaPredicted RBP15.21■□□□□ 0.03
TCOF1-210ENST00000506767 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 CAPNS2Q96L46 248 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 WDR18Q9BV38 432 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 KCNH4Q9UQ05 1017 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 ZHX2Q9Y6X8 837 aa15.21■□□□□ 0.03
TCOF1-210ENST00000506767 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
TCOF1-210ENST00000506767 MPHOSPH10O00566 681 aaKnown RBP15.2■□□□□ 0.02
TCOF1-210ENST00000506767 IRF6O14896 467 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 CAPN15O75808 1086 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 VEGFBP49765 207 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 RAB3GAP1Q15042 981 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 FAM47AQ5JRC9 791 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 SIAH1Q8IUQ4 282 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 KRT23Q9C075 422 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 CNNM2Q9H8M5 875 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 AS3MTQ9HBK9 375 aa15.2■□□□□ 0.02
TCOF1-210ENST00000506767 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-210ENST00000506767 THSD7BQ9C0I4 1608 aa15.19■□□□□ 0.02
TCOF1-210ENST00000506767 CXCL11O14625 94 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms