RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 TRIM37O94972 964 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 SOX9P48436 509 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 KIF4BQ2VIQ3 1234 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 MCF2L2Q86YR7 1114 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 GOLM1Q8NBJ4 401 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 GATA6Q92908 595 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 DRC1Q96MC2 740 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 CBX8Q9HC52 389 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 LRRC4CQ9HCJ2 640 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 BSDC1Q9NW68 430 aaPredicted RBP6.52□□□□□ -1.37
CLOCK-205ENST00000506747 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 INPP5FQ9Y2H2 1132 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 SUPT16HQ9Y5B9 1047 aaKnown RBP6.52□□□□□ -1.37
CLOCK-205ENST00000506747 PCDHGC5Q9Y5F6 944 aa6.52□□□□□ -1.37
CLOCK-205ENST00000506747 RNGTTO60942 597 aaKnown RBP6.51□□□□□ -1.37
CLOCK-205ENST00000506747 MAP1SQ66K74 1059 aaPredicted RBP6.51□□□□□ -1.37
CLOCK-205ENST00000506747 LLGL2Q6P1M3 1020 aa6.51□□□□□ -1.37
CLOCK-205ENST00000506747 SPOCD1Q6ZMY3 1216 aa6.51□□□□□ -1.37
CLOCK-205ENST00000506747 ZNF765Q7L2R6 523 aa6.51□□□□□ -1.37
CLOCK-205ENST00000506747 FBXO27Q8NI29 283 aa6.51□□□□□ -1.37
CLOCK-205ENST00000506747 SEC16BQ96JE7 1060 aa6.51□□□□□ -1.37
CLOCK-205ENST00000506747 SAMM50Q9Y512 469 aa6.51□□□□□ -1.37
CLOCK-205ENST00000506747 GFRA2O00451 464 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
CLOCK-205ENST00000506747 RBL2Q08999 1139 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 LRRC14Q15048 493 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 ZNF648Q5T619 568 aaPredicted RBP6.5□□□□□ -1.37
CLOCK-205ENST00000506747 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 SMYD4Q8IYR2 804 aaPredicted RBP6.5□□□□□ -1.37
CLOCK-205ENST00000506747 ARMC5Q96C12 935 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 ACSBG1Q96GR2 724 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 SPATA32Q96LK8 384 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 C1GALT1Q9NS00 363 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 ARID5AQ03989 594 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 RING1Q06587 406 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 SEPT6Q14141 434 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 MPP2Q14168 576 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 TTLL4Q14679 1199 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 SF3A1Q15459 793 aaKnown RBP6.5□□□□□ -1.37
CLOCK-205ENST00000506747 CYP27C1Q4G0S4 372 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 OGFOD3Q6PK18 319 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.5□□□□□ -1.37
CLOCK-205ENST00000506747 FLCNQ8NFG4 579 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 MIR1-1HGQ9H1L0 117 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 SSU72Q9NP77 194 aaKnown RBP6.5□□□□□ -1.37
CLOCK-205ENST00000506747 DISC1Q9NRI5 854 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 GINM1Q9NU53 330 aa6.5□□□□□ -1.37
CLOCK-205ENST00000506747 PRR36Q9H6K5 1346 aa6.49□□□□□ -1.37
CLOCK-205ENST00000506747 PAPLNO95428 1278 aa6.49□□□□□ -1.37
CLOCK-205ENST00000506747 HCLS1P14317 486 aaPredicted RBP6.49□□□□□ -1.37
CLOCK-205ENST00000506747 CDK8P49336 464 aa6.49□□□□□ -1.37
CLOCK-205ENST00000506747 GNL2Q13823 731 aaKnown RBP6.49□□□□□ -1.37
CLOCK-205ENST00000506747 COL9A2Q14055 689 aaPredicted RBP6.49□□□□□ -1.37
CLOCK-205ENST00000506747 SNAP47Q5SQN1 464 aa6.49□□□□□ -1.37
CLOCK-205ENST00000506747 GPBAR1Q8TDU6 330 aa6.49□□□□□ -1.37
CLOCK-205ENST00000506747 PAK6Q9NQU5 681 aaPredicted RBP6.49□□□□□ -1.37
CLOCK-205ENST00000506747 POLR3KQ9Y2Y1 108 aaPredicted RBP6.49□□□□□ -1.37
CLOCK-205ENST00000506747 LOC105371045A0A1W2PR82 267 aa6.48□□□□□ -1.37
CLOCK-205ENST00000506747 FAM87AP0C7U9 286 aa6.48□□□□□ -1.37
CLOCK-205ENST00000506747 RPL6Q02878 288 aaKnown RBP6.48□□□□□ -1.37
CLOCK-205ENST00000506747 CDK5R2Q13319 367 aa6.48□□□□□ -1.37
CLOCK-205ENST00000506747 INPP5AQ14642 412 aa6.48□□□□□ -1.37
CLOCK-205ENST00000506747 ZNF124Q15973 351 aa6.48□□□□□ -1.37
CLOCK-205ENST00000506747 REC114Q7Z4M0 266 aa6.48□□□□□ -1.37
CLOCK-205ENST00000506747 TANGO6Q9C0B7 1094 aa6.48□□□□□ -1.37
CLOCK-205ENST00000506747 ZC3H7BQ9UGR2 993 aaKnown RBP6.48□□□□□ -1.37
CLOCK-205ENST00000506747 PCOLCE2Q9UKZ9 415 aa6.48□□□□□ -1.37
CLOCK-205ENST00000506747 DNAJA1P31689 397 aaKnown RBP6.47□□□□□ -1.37
CLOCK-205ENST00000506747 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
CLOCK-205ENST00000506747 ZC3H12AQ5D1E8 599 aaKnown RBP6.47□□□□□ -1.37
CLOCK-205ENST00000506747 REXO1Q8N1G1 1221 aaKnown RBP6.47□□□□□ -1.37
CLOCK-205ENST00000506747 UBXN4Q92575 508 aa6.47□□□□□ -1.37
CLOCK-205ENST00000506747 EHMT1Q9H9B1 1298 aa6.47□□□□□ -1.37
CLOCK-205ENST00000506747 PICK1Q9NRD5 415 aa6.47□□□□□ -1.37
CLOCK-205ENST00000506747 EFR3BQ9Y2G0 817 aa6.47□□□□□ -1.37
CLOCK-205ENST00000506747 BIN1O00499 593 aa6.46□□□□□ -1.38
CLOCK-205ENST00000506747 FARP2O94887 1054 aaPredicted RBP6.46□□□□□ -1.38
CLOCK-205ENST00000506747 ATE1O95260 518 aa6.46□□□□□ -1.38
CLOCK-205ENST00000506747 NTF4P34130 210 aa6.46□□□□□ -1.38
CLOCK-205ENST00000506747 ERVK-24P63145 666 aa6.46□□□□□ -1.38
CLOCK-205ENST00000506747 CYFIP1Q7L576 1253 aa6.46□□□□□ -1.38
CLOCK-205ENST00000506747 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLOCK-205ENST00000506747 RNF214Q8ND24 703 aa6.46□□□□□ -1.38
CLOCK-205ENST00000506747 JARID2Q92833 1246 aaPredicted RBP6.46□□□□□ -1.38
CLOCK-205ENST00000506747 NKD1Q969G9 470 aa6.46□□□□□ -1.38
CLOCK-205ENST00000506747 SHDQ96IW2 340 aa6.46□□□□□ -1.38
CLOCK-205ENST00000506747 NEFMP07197 916 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 NASPP49321 788 aaPredicted RBP6.45□□□□□ -1.38
CLOCK-205ENST00000506747 PKN1Q16512 942 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 LRFN4Q6PJG9 635 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 ARHGAP27Q6ZUM4 889 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 VPS37DQ86XT2 251 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 ISL2Q96A47 359 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 BRMS1Q9HCU9 246 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 USP35Q9P2H5 1018 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 TACC3Q9Y6A5 838 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 SNCAIPQ9Y6H5 919 aa6.45□□□□□ -1.38
CLOCK-205ENST00000506747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.45□□□□□ -1.38
CLOCK-205ENST00000506747 ATP2B1P20020 1258 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms