RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 CST9Q5W186 159 aa8.4□□□□□ -1.06
SMAD5-201ENST00000506223 GIPC2Q8TF65 315 aa8.4□□□□□ -1.06
SMAD5-201ENST00000506223 CEP63Q96MT8 703 aa8.4□□□□□ -1.06
SMAD5-201ENST00000506223 NARFQ9UHQ1 456 aa8.4□□□□□ -1.06
SMAD5-201ENST00000506223 NUDCQ9Y266 331 aa8.4□□□□□ -1.06
SMAD5-201ENST00000506223 USP20Q9Y2K6 914 aa8.4□□□□□ -1.06
SMAD5-201ENST00000506223 COL15A1P39059 1388 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 TRAF5O00463 557 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 CA12O43570 354 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 RPLP1P05386 114 aaKnown RBP8.39□□□□□ -1.07
SMAD5-201ENST00000506223 P4HBP07237 508 aaKnown RBP8.39□□□□□ -1.07
SMAD5-201ENST00000506223 IL13P35225 146 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 MAP2K2P36507 400 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 LBRQ14739 615 aaKnown RBP8.39□□□□□ -1.07
SMAD5-201ENST00000506223 C8orf34Q49A92 452 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 SAMD5Q5TGI4 173 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 FBXO33Q7Z6M2 555 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 PNMA8AQ86V59 439 aaPredicted RBP8.39□□□□□ -1.07
SMAD5-201ENST00000506223 DNAJC10Q8IXB1 793 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 TTC16Q8NEE8 873 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 GMPR2Q9P2T1 348 aaKnown RBP8.39□□□□□ -1.07
SMAD5-201ENST00000506223 SCN11AQ9UI33 1791 aa8.39□□□□□ -1.07
SMAD5-201ENST00000506223 EPB42P16452 691 aa8.38□□□□□ -1.07
SMAD5-201ENST00000506223 ZNF16P17020 682 aaPredicted RBP8.38□□□□□ -1.07
SMAD5-201ENST00000506223 EHHADHQ08426 723 aa8.38□□□□□ -1.07
SMAD5-201ENST00000506223 DSC3Q14574 896 aa8.38□□□□□ -1.07
SMAD5-201ENST00000506223 AKAP4Q5JQC9 854 aa8.38□□□□□ -1.07
SMAD5-201ENST00000506223 CIAPIN1Q6FI81 312 aa8.38□□□□□ -1.07
SMAD5-201ENST00000506223 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
SMAD5-201ENST00000506223 ALKBH8Q96BT7 664 aaKnown RBP8.38□□□□□ -1.07
SMAD5-201ENST00000506223 MKI67P46013 3256 aaKnown RBP8.37□□□□□ -1.07
SMAD5-201ENST00000506223 NPC1L1Q9UHC9 1359 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 SCN7AQ01118 1682 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 PLCB3Q01970 1234 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 TRIP4Q15650 581 aaPredicted RBP8.37□□□□□ -1.07
SMAD5-201ENST00000506223 HABP4Q5JVS0 413 aaKnown RBP8.37□□□□□ -1.07
SMAD5-201ENST00000506223 TTC5Q8N0Z6 440 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
SMAD5-201ENST00000506223 CCDC155Q8N6L0 562 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 BRIP1Q9BX63 1249 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 NIF3L1Q9GZT8 377 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 BRD7Q9NPI1 651 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 ZNF277Q9NRM2 450 aaPredicted RBP8.37□□□□□ -1.07
SMAD5-201ENST00000506223 ZBTB1Q9Y2K1 713 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 BCORQ6W2J9 1755 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 AKAP11Q9UKA4 1901 aa8.37□□□□□ -1.07
SMAD5-201ENST00000506223 A6NHS1 94 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 THBS1P07996 1170 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 CYP19A1P11511 503 aaPredicted RBP8.36□□□□□ -1.07
SMAD5-201ENST00000506223 PDE6BP35913 854 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 MAPK8P45983 427 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 TEFQ10587 303 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 TBC1D9BQ66K14 1250 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 PRR5LQ6MZQ0 368 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 FIGNL1Q6PIW4 674 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 OLFM4Q6UX06 510 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 Q6ZNB5 142 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 ZCCHC2Q9C0B9 1178 aaKnown RBP8.36□□□□□ -1.07
SMAD5-201ENST00000506223 NUCKS1Q9H1E3 243 aaKnown RBP8.36□□□□□ -1.07
SMAD5-201ENST00000506223 FNDC3AQ9Y2H6 1198 aaKnown RBP8.36□□□□□ -1.07
SMAD5-201ENST00000506223 KCNMB2Q9Y691 235 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 COL4A5P29400 1685 aa8.36□□□□□ -1.07
SMAD5-201ENST00000506223 UNCXA6NJT0 531 aa8.35□□□□□ -1.07
SMAD5-201ENST00000506223 H7C1W4 665 aa8.35□□□□□ -1.07
SMAD5-201ENST00000506223 FZD9O00144 591 aa8.35□□□□□ -1.07
SMAD5-201ENST00000506223 ATXN7O15265 892 aaPredicted RBP8.35□□□□□ -1.07
SMAD5-201ENST00000506223 FAM157BP0CG42 384 aa8.35□□□□□ -1.07
SMAD5-201ENST00000506223 U2AF1L5P0DN76 240 aaPredicted RBP8.35□□□□□ -1.07
SMAD5-201ENST00000506223 SNRPBP14678 240 aaKnown RBP8.35□□□□□ -1.07
SMAD5-201ENST00000506223 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
SMAD5-201ENST00000506223 U2AF1Q01081 240 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMAD5-201ENST00000506223 TAGLNQ01995 201 aaKnown RBP8.35□□□□□ -1.07
SMAD5-201ENST00000506223 STYK1Q6J9G0 422 aa8.35□□□□□ -1.07
SMAD5-201ENST00000506223 SAPCD2Q86UD0 394 aa8.35□□□□□ -1.07
SMAD5-201ENST00000506223 RTF1Q92541 710 aaKnown RBP8.35□□□□□ -1.07
SMAD5-201ENST00000506223 GCC1Q96CN9 775 aa8.35□□□□□ -1.07
SMAD5-201ENST00000506223 CUEDC1Q9NWM3 386 aaPredicted RBP8.35□□□□□ -1.07
SMAD5-201ENST00000506223 PCDHGC4Q9Y5F7 938 aa8.35□□□□□ -1.07
SMAD5-201ENST00000506223 GNAT3A8MTJ3 354 aa8.34□□□□□ -1.07
SMAD5-201ENST00000506223 SRGNP10124 158 aa8.34□□□□□ -1.07
SMAD5-201ENST00000506223 MTHFSDQ2M296 383 aaKnown RBP8.34□□□□□ -1.07
SMAD5-201ENST00000506223 CCDC93Q567U6 631 aa8.34□□□□□ -1.07
SMAD5-201ENST00000506223 SOGA3Q5TF21 947 aa8.34□□□□□ -1.07
SMAD5-201ENST00000506223 TRIM22Q8IYM9 498 aa8.34□□□□□ -1.07
SMAD5-201ENST00000506223 GPC2Q8N158 579 aa8.34□□□□□ -1.07
SMAD5-201ENST00000506223 SLC52A2Q9HAB3 445 aa8.34□□□□□ -1.07
SMAD5-201ENST00000506223 SZT2Q5T011 3432 aa8.34□□□□□ -1.07
SMAD5-201ENST00000506223 DCDC2BA2VCK2 349 aa8.33□□□□□ -1.08
SMAD5-201ENST00000506223 E9PSI1 815 aa8.33□□□□□ -1.08
SMAD5-201ENST00000506223 KHNYNO15037 678 aaKnown RBP8.33□□□□□ -1.08
SMAD5-201ENST00000506223 RNMTO43148 476 aaKnown RBP8.33□□□□□ -1.08
SMAD5-201ENST00000506223 EFSO43281 561 aa8.33□□□□□ -1.08
SMAD5-201ENST00000506223 CELF2O95319 508 aaKnown RBP8.33□□□□□ -1.08
SMAD5-201ENST00000506223 ITGA6P23229 1130 aa8.33□□□□□ -1.08
SMAD5-201ENST00000506223 PRKAR2BP31323 418 aa8.33□□□□□ -1.08
SMAD5-201ENST00000506223 EPS15P42566 896 aa8.33□□□□□ -1.08
SMAD5-201ENST00000506223 FXR1P51114 621 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMAD5-201ENST00000506223 UBAP2LQ14157 1087 aaKnown RBP8.33□□□□□ -1.08
SMAD5-201ENST00000506223 DBN1Q16643 649 aa8.33□□□□□ -1.08
SMAD5-201ENST00000506223 PDE12Q6L8Q7 609 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms