RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 KIAA1524Q8TCG1 905 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 ANKRD49Q8WVL7 239 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 ZNF75CPQ92670 426 aaPredicted RBP10.15□□□□□ -0.78
HTT-203ENST00000506137 DDX12PQ92771 950 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 CHMP4CQ96CF2 233 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 UCN2Q96RP3 112 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 NOL10Q9BSC4 688 aaKnown RBP10.15□□□□□ -0.78
HTT-203ENST00000506137 LRRCC1Q9C099 1032 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 OSBPL5Q9H0X9 879 aaPredicted RBP10.15□□□□□ -0.78
HTT-203ENST00000506137 ZNF304Q9HCX3 659 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 RASSF1Q9NS23 344 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 ATG3Q9NT62 314 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 ARGLU1Q9NWB6 273 aaPredicted RBP10.15□□□□□ -0.78
HTT-203ENST00000506137 AIPL1Q9NZN9 384 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 SUFUQ9UMX1 484 aa10.15□□□□□ -0.78
HTT-203ENST00000506137 NOSIPQ9Y314 301 aaKnown RBP10.15□□□□□ -0.78
HTT-203ENST00000506137 PRDM15P57071 1507 aaPredicted RBP10.15□□□□□ -0.78
HTT-203ENST00000506137 ZBTB39O15060 712 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 MUSKO15146 869 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 ERLIN1O75477 346 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 SCGB1D2O95969 90 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 CD9P21926 228 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 HALP42357 657 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 CCDC178Q5BJE1 867 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 NUTM2GQ5VZR2 741 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 CDCA2Q69YH5 1023 aaPredicted RBP10.14□□□□□ -0.79
HTT-203ENST00000506137 RASGRP2Q7LDG7 609 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 LRP10Q7Z4F1 713 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 CCDC65Q8IXS2 484 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 TTC8Q8TAM2 541 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 UHMK1Q8TAS1 419 aaKnown RBP10.14□□□□□ -0.79
HTT-203ENST00000506137 RSAD2Q8WXG1 361 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 KCTD5Q9NXV2 234 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 IL20Q9NYY1 176 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 SETD5Q9C0A6 1442 aa10.14□□□□□ -0.79
HTT-203ENST00000506137 SYNJ2BP-COX16A0A087WUM0 186 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 TRIM64A6NGJ6 449 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 TRIM64BA6NI03 449 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 M0QX08 132 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 PPEF1O14829 653 aaPredicted RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 SORBS3O60504 671 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 ECEL1O95672 775 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 CD44P16070 742 aaKnown RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 FERP16591 822 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 INPP5BP32019 993 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 GNL1P36915 607 aaPredicted RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 GABREP78334 506 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 MRPS35P82673 323 aaKnown RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 NSUN2Q08J23 767 aaKnown RBP eCLIP10.13□□□□□ -0.79
HTT-203ENST00000506137 CBLBQ13191 982 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 INF2Q27J81 1249 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 PREPLQ4J6C6 727 aaPredicted RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 MCTP2Q6DN12 878 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 CYP26C1Q6V0L0 522 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 C14orf80Q86SX3 495 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 NCAPG2Q86XI2 1143 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 KRT222Q8N1A0 295 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 OR8H1Q8NGG4 311 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 C1orf216Q8TAB5 229 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 TEKT4Q8WW24 435 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 ATXN2LQ8WWM7 1075 aaKnown RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 ARHGEF2Q92974 986 aaKnown RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 TRIM11Q96F44 468 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 FBXO10Q9UK96 956 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 SPG7Q9UQ90 795 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 KIDINS220Q9ULH0 1771 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 RGPD1P0DJD0 1748 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 KIAA1210Q9ULL0 1709 aa10.13□□□□□ -0.79
HTT-203ENST00000506137 BRD4O60885 1362 aaPredicted RBP10.13□□□□□ -0.79
HTT-203ENST00000506137 RNF123Q5XPI4 1314 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 C19orf67A6NJJ6 358 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 TMCC2O75069 709 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 TADA3O75528 432 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 SMC2O95347 1197 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 KRT13P13646 458 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 EPB42P16452 691 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 NDUFV2P19404 249 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 HPDP32754 393 aaPredicted RBP10.12□□□□□ -0.79
HTT-203ENST00000506137 CCT5P48643 541 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 CTCFP49711 727 aaPredicted RBP10.12□□□□□ -0.79
HTT-203ENST00000506137 PRKG2Q13237 762 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 PICALMQ13492 652 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 BECN1Q14457 450 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 KIF4BQ2VIQ3 1234 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 METTL24Q5JXM2 366 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 SPDYCQ5MJ68 293 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 UNC5DQ6UXZ4 953 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 RSRC2Q7L4I2 434 aaKnown RBP10.12□□□□□ -0.79
HTT-203ENST00000506137 PEX5LQ8IYB4 626 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 DRAXINQ8NBI3 349 aaPredicted RBP10.12□□□□□ -0.79
HTT-203ENST00000506137 PI4K2BQ8TCG2 481 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 BICD2Q8TD16 824 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.12□□□□□ -0.79
HTT-203ENST00000506137 HIC2Q96JB3 615 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 SH3GL1Q99961 368 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 MFRPQ9BY79 579 aa10.12□□□□□ -0.79
HTT-203ENST00000506137 PIH1D1Q9NWS0 290 aaKnown RBP10.12□□□□□ -0.79
HTT-203ENST00000506137 DAAM1Q9Y4D1 1078 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms