RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ARMCX6Q7L4S7 300 aa9.09□□□□□ -0.95
NIPBL-205ENST00000505998 SLC51AQ86UW1 340 aa9.09□□□□□ -0.95
NIPBL-205ENST00000505998 MCATQ8IVS2 390 aaKnown RBP9.09□□□□□ -0.95
NIPBL-205ENST00000505998 EFR3BQ9Y2G0 817 aa9.09□□□□□ -0.95
NIPBL-205ENST00000505998 K7ELQ4 463 aaPredicted RBP9.08□□□□□ -0.96
NIPBL-205ENST00000505998 ATE1O95260 518 aa9.08□□□□□ -0.96
NIPBL-205ENST00000505998 PRSS36Q5K4E3 855 aa9.08□□□□□ -0.96
NIPBL-205ENST00000505998 VPS37DQ86XT2 251 aa9.08□□□□□ -0.96
NIPBL-205ENST00000505998 FAM13CQ8NE31 585 aa9.08□□□□□ -0.96
NIPBL-205ENST00000505998 EHMT1Q9H9B1 1298 aa9.08□□□□□ -0.96
NIPBL-205ENST00000505998 GINM1Q9NU53 330 aa9.08□□□□□ -0.96
NIPBL-205ENST00000505998 KLHL3Q9UH77 587 aa9.08□□□□□ -0.96
NIPBL-205ENST00000505998 WDR64B1ANS9 1081 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 CST3P01034 146 aaPredicted RBP9.07□□□□□ -0.96
NIPBL-205ENST00000505998 F13BP05160 661 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 YARSP54577 528 aaKnown RBP9.07□□□□□ -0.96
NIPBL-205ENST00000505998 ZC3H6P61129 1189 aaKnown RBP9.07□□□□□ -0.96
NIPBL-205ENST00000505998 PRAMEF13Q5VWM6 474 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 TOP6BLQ8N6T0 577 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 MFSD2AQ8NA29 543 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 SHKBP1Q8TBC3 707 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 GATA6Q92908 595 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 PSMG3-AS1Q96PY0 264 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 FERD3LQ96RJ6 166 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 ATG3Q9NT62 314 aa9.07□□□□□ -0.96
NIPBL-205ENST00000505998 FAM87AP0C7U9 286 aa9.06□□□□□ -0.96
NIPBL-205ENST00000505998 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
NIPBL-205ENST00000505998 OGFOD3Q6PK18 319 aa9.06□□□□□ -0.96
NIPBL-205ENST00000505998 SHISA5Q8N114 240 aa9.06□□□□□ -0.96
NIPBL-205ENST00000505998 DPH2Q9BQC3 489 aaPredicted RBP9.06□□□□□ -0.96
NIPBL-205ENST00000505998 TINF2Q9BSI4 451 aa9.06□□□□□ -0.96
NIPBL-205ENST00000505998 OSBPL1AQ9BXW6 950 aa9.06□□□□□ -0.96
NIPBL-205ENST00000505998 PRDM10Q9NQV6 1147 aa9.06□□□□□ -0.96
NIPBL-205ENST00000505998 FAM170BA6NMN3 283 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 UPK3BL1B0FP48 263 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 UPK3BL2E5RIL1 263 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 IMPDH2P12268 514 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 RANGAP1P46060 587 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-205ENST00000505998 SOX9P48436 509 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 NASPP49321 788 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-205ENST00000505998 CYP27C1Q4G0S4 372 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 DUSP27Q5VZP5 1158 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 FBXW10Q5XX13 1052 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 XAGE3Q8WTP9 111 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 SEC16BQ96JE7 1060 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 MIPEPQ99797 713 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 METTL22Q9BUU2 404 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-205ENST00000505998 DUSP23Q9BVJ7 150 aa9.05□□□□□ -0.96
NIPBL-205ENST00000505998 CHURC1-FNTBB4DL54 471 aa9.04□□□□□ -0.96
NIPBL-205ENST00000505998 LEFTY1O75610 366 aa9.04□□□□□ -0.96
NIPBL-205ENST00000505998 LRRFIP1Q32MZ4 808 aaKnown RBP9.04□□□□□ -0.96
NIPBL-205ENST00000505998 ZNF765Q7L2R6 523 aa9.04□□□□□ -0.96
NIPBL-205ENST00000505998 GMIPQ9P107 970 aa9.04□□□□□ -0.96
NIPBL-205ENST00000505998 ZNRF3Q9ULT6 936 aa9.04□□□□□ -0.96
NIPBL-205ENST00000505998 PPT2Q9UMR5 302 aa9.04□□□□□ -0.96
NIPBL-205ENST00000505998 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
NIPBL-205ENST00000505998 SLC22A31A6NKX4 558 aa9.03□□□□□ -0.96
NIPBL-205ENST00000505998 DNAJA2O60884 412 aa9.03□□□□□ -0.96
NIPBL-205ENST00000505998 ATF4P18848 351 aaPredicted RBP9.03□□□□□ -0.96
NIPBL-205ENST00000505998 NAALADL2Q58DX5 795 aa9.03□□□□□ -0.96
NIPBL-205ENST00000505998 ZDHHC13Q8IUH4 622 aa9.03□□□□□ -0.96
NIPBL-205ENST00000505998 SLITRK5O94991 958 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 CPSF6Q16630 551 aaKnown RBP eCLIP9.02□□□□□ -0.97
NIPBL-205ENST00000505998 OVOS1Q6IE37 1185 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 LETMD1Q6P1Q0 360 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 CCDC81Q6ZN84 652 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 SLFN12Q8IYM2 578 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 PHACTR4Q8IZ21 702 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 SLC43A3Q8NBI5 491 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 CPLX3Q8WVH0 158 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 TMEM40Q8WWA1 233 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 CRBNQ96SW2 442 aa9.02□□□□□ -0.97
NIPBL-205ENST00000505998 ADAM23O75077 832 aa9.01□□□□□ -0.97
NIPBL-205ENST00000505998 RAG1P15918 1043 aa9.01□□□□□ -0.97
NIPBL-205ENST00000505998 DNAJA1P31689 397 aaKnown RBP9.01□□□□□ -0.97
NIPBL-205ENST00000505998 ARID5AQ03989 594 aa9.01□□□□□ -0.97
NIPBL-205ENST00000505998 ARSHQ5FYA8 562 aa9.01□□□□□ -0.97
NIPBL-205ENST00000505998 CYB5D2Q8WUJ1 264 aa9.01□□□□□ -0.97
NIPBL-205ENST00000505998 C8orf37Q96NL8 207 aa9.01□□□□□ -0.97
NIPBL-205ENST00000505998 SRRTQ9BXP5 876 aaKnown RBP9.01□□□□□ -0.97
NIPBL-205ENST00000505998 ANTXR1Q9H6X2 564 aa9.01□□□□□ -0.97
NIPBL-205ENST00000505998 TPX2Q9ULW0 747 aaKnown RBP9.01□□□□□ -0.97
NIPBL-205ENST00000505998 LEMD3Q9Y2U8 911 aa9.01□□□□□ -0.97
NIPBL-205ENST00000505998 MEIS3P2A8K0S8 358 aa9□□□□□ -0.97
NIPBL-205ENST00000505998 ITGB7P26010 798 aa9□□□□□ -0.97
NIPBL-205ENST00000505998 CCDC74BQ96LY2 380 aa9□□□□□ -0.97
NIPBL-205ENST00000505998 STRIP2Q9ULQ0 834 aa9□□□□□ -0.97
NIPBL-205ENST00000505998 EOMESO95936 686 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 EIF6P56537 245 aaKnown RBP8.99□□□□□ -0.97
NIPBL-205ENST00000505998 CDCP2Q5VXM1 449 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 NLRC3Q7RTR2 1065 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 CDH24Q86UP0 819 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 RIN3Q8TB24 985 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 ATG4CQ96DT6 458 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.99□□□□□ -0.97
NIPBL-205ENST00000505998 LRRC4CQ9HCJ2 640 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 PIM2Q9P1W9 311 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 GTF2IRD1Q9UHL9 959 aa8.99□□□□□ -0.97
NIPBL-205ENST00000505998 PRR19A6NJB7 356 aa8.98□□□□□ -0.97
NIPBL-205ENST00000505998 CYP26A1O43174 497 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms